Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0039 ATGGATAATGACAAATCCTCAAGTTACGGTGGAGGTCTTCCGCCTTCGGGACGTTATTCAGGCTTCTCACCTCCTGGAAGCTCTTTCAACGTGAAACCAGAAGCGTCCTCCTCCTCATCATCTTTTCCTCCACTGGTACCCGGTACCAGCTCGGACTTTAGTGGCTTCAGTCATGATATTAGCAGAATGCCTGATAATCCTCCTAGAAACAGGGGTCATAGACGGGCCCATTCTGAGATTCTCACGCTGCCAGAGGATCTAAGTTTTGACAGTGACCTTGGTGTAGTTGGAGGTGCTGACGGGCCTTCCTTTTCTGATGAGACTGAGGAAGACTTACTATCGATGTACCTTGATATGGATAAATTTAACTCTTCATCTGCGACATCTGCATTTCAAGTGGGCGAGGCTGGAGCATCAGCTCCAGCGCCAAAATTAGAACCAACATCGGGAATTGCTGCCTCTTCTGCAGAGAATGCTGCTATTGATACTAATGAAAGGCCCAGAGTTAGGCACCAACATAGCCAGTCAATGGATGGGTCAACAACAATTAAACCTGAGATCCTAGTATCAGGTTCTGAAGAAGTTTCTGCAGCTGATTCCAAAAAGGCAATGTCAGCTGCCAAGCTTGCGGAACTTGCCTCAGTTGACCCAAAGCGTGCCAAAAGGATATGGGCAAACAGGCAGTCTGCTGCGAGGTCAAAAGAGAGGAAGATGCGCTATATTGCTGAGCTTGAAAGGAAGGTTCAGACCCTTCAAACAGAAGCAACATCTTTGTCTGCACAATTAACTCTCCTGCAGAGGGATACCAATGGGCTGAATGCTGAGAACAGTGAGCTGAAGCTGCGGTTGCAAACCATGGAACAACAAGTTCACTTGCAAGATGCTTTAAATGACGCGTTGAAAGAGGAAATTCAGCATTTGAAACTAGTAACGGGACAGGCTATGATGAATGGAGGACCTGTGATGAACTTTGCTCCTTTTGGAGGAGGGCAGCAATTTTATCCCAACAATCACGCCATGCACACTCTCTTGGCAACTCAACAGTTTCAACTGCTCCAGATTCATTCTCAGAAGCAGCAGCTTCAGCAACATCAACTGCATCAGCTTCAGCAGCAACAAACGGGAGACTTGAAAATGAGAACTACTACTCGTTCTCCAAGCCCCAAAGATCGAAATCCACCACCACCCAAGGATTGTTGA 1200 0.47 MDNDKSSSYGGGLPPSGRYSGFSPPGSSFNVKPEASSSSSSFPPLVPGTSSDFSGFSHDISRMPDNPPRNRGHRRAHSEILTLPEDLSFDSDLGVVGGADGPSFSDETEEDLLSMYLDMDKFNSSSATSAFQVGEAGASAPAPKLEPTSGIAASSAENAAIDTNERPRVRHQHSQSMDGSTTIKPEILVSGSEEVSAADSKKAMSAAKLAELASVDPKRAKRIWANRQSAARSKERKMRYIAELERKVQTLQTEATSLSAQLTLLQRDTNGLNAENSELKLRLQTMEQQVHLQDALNDALKEEIQHLKLVTGQAMMNGGPVMNFAPFGGGQQFYPNNHAMHTLLATQQFQLLQIHSQKQQLQQHQLHQLQQQQTGDLKMRTTTRSPSPKDRNPPPPKDC 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0039 399 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 216 279 IPR004827 GO:0003700|GO:0006355
Lele29g0039 399 SMART brlzneu 214 278 IPR004827 GO:0003700|GO:0006355
Lele29g0039 399 MobiDBLite consensus disorder prediction 21 57 - -
Lele29g0039 399 MobiDBLite consensus disorder prediction 363 382 - -
Lele29g0039 399 Coils Coil 234 303 - -
Lele29g0039 399 Pfam bZIP transcription factor 218 274 IPR004827 GO:0003700|GO:0006355
Lele29g0039 399 MobiDBLite consensus disorder prediction 138 180 - -
Lele29g0039 399 SUPERFAMILY Leucine zipper domain 218 269 IPR046347 GO:0003700|GO:0006355
Lele29g0039 399 FunFam probable transcription factor PosF21 217 270 - -
Lele29g0039 399 MobiDBLite consensus disorder prediction 363 399 - -
Lele29g0039 399 Gene3D - 217 290 - -
Lele29g0039 399 CDD bZIP_plant_RF2 219 268 IPR044759 GO:0003700|GO:0006355
Lele29g0039 399 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 21 376 - -
Lele29g0039 399 MobiDBLite consensus disorder prediction 1 107 - -
Lele29g0039 399 MobiDBLite consensus disorder prediction 64 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0039 Lele-ChrLele29 260253 262938 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0039 18 345 bZIP Transcription Factor Family AT1G06070 73.333 2.07e-167 474
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele29g0039 bZIP_1 1.4e-08 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0039 29 260253 262938 Lele31g1505 31 20293200 20296116 hybridization
Lele29g0039 29 260253 262938 Lele32g0039 32 265496 268354 hybridization