Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0021 ATGACGGCCAGCTCCTTCTGCAATGCTGACTCTGTGTTCTCGAGAGAAGAAGGCGTAGACATTAGAAAGATGATGGAACCAAAGAGGAGCCTCTGCTCTGTGGATCAGAGCAATTATACATCTGTTGCATCTAAAAGACATAAGGCTGATTTATCCATCTCCACAAAGGAGAGAAAGGAGAAGATCGGGGAACGAATTGTTGCCTTGCAGCAGCTCGTTTCTCCATTTGGGAAGTCAGATACAGCTTCGGTTCTTTTAGAGGCAACTCACTATATAAGTTTCCTTCATAAACAAGTTAAGGTGCTTAGTGCTCCTTATCTGCAATGCTCTCCTACAAGCAAAACGCAGGATGTAGAGGCGTACAGCCTGAGGAGTAGAGGATTATGTCTGGTTCCAGTGTCGTATACGATTGGAGTTGCCCAGAGCAATGGTGCAGATATATGGGCCCCCACCAAAAGCGCATCGTCACAATTTAACTAG 480 0.4562 MTASSFCNADSVFSREEGVDIRKMMEPKRSLCSVDQSNYTSVASKRHKADLSISTKERKEKIGERIVALQQLVSPFGKSDTASVLLEATHYISFLHKQVKVLSAPYLQCSPTSKTQDVEAYSLRSRGLCLVPVSYTIGVAQSNGADIWAPTKSASSQFN 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0021 159 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 52 110 IPR036638 GO:0046983
Lele29g0021 159 SMART finulus 52 101 IPR011598 GO:0046983
Lele29g0021 159 FunFam Transcription factor bHLH113 family 45 121 - -
Lele29g0021 159 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 46 95 IPR011598 GO:0046983
Lele29g0021 159 Gene3D - 43 116 IPR036638 GO:0046983
Lele29g0021 159 CDD bHLH_AtbHLH_like 52 103 IPR045239 -
Lele29g0021 159 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 39 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0021 Lele-ChrLele29 144872 148274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0021 24 153 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05710 57.237 5.60e-57 174