Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0018 ATGATGGATTTGGCCCTGGATTTCCTGGTTCCGTCTTTGTGGGAGATCAAAGTCACAGTTGCCACCTCCATGTTTGTGATAATCGCCTATTGGTTTTTCACGTACAGAACTGGAGACTTTGATGTTGATCGGGTACTTGTTGACAATTCCGGGGATGCTTCTGAAGACAAAGACAAGATAGCCCAGTTTAAAGGAGATTCTCAGACCAATTCGGCATATTTGATCAAGTTGGAACTGTTGGCTGCTAAGAATCTTATTGGTGCAAATTTAAATGGCATGTCAGATCCTTATGCTATCATCACATGTGGCAATGAGAAGAGATTCAGTTCCATGGTTCCTGGTTCAAGAAATCCAATGTGGGGTGAAGAATTCAATTTCTCTGTCGATGAACTTCCTGTCCAGATTAACATTACAATATATGATTGGGATATTATTTGGAAAAGTGCTGTTCTAGGTTCAGTGACTGTTCCAGTTGAAAAAGAAGGTCAAACTGGTGCAGTATGGATGAATGGGTATGGCGTAACTAGCACTCGCAGAAGGATGCCCACAGAAAAGCAAGGGCCTACTGTTGTTCATCAAAAGCCAGGGCCTCTTCAGACAATATTTAATCTTCTTCCAGATGAGGTTGTTGAACATAGTTACTCTTGTGCACTTGAGAGGTCATTTTTGTATCATGGTCGTATGTATGCCTCAGCATTGCGTAGAGTAAGATACAAATTTGCATCATTTTGGAATAGGAATCATACATTTAGAAATTTACAACGTGCAGCAAAGATTTTCCGTGAGATGCTGGAAGCTGAGAAGAAGGTTGCTCCTGCTCCATTTGATGTTCTTAATCTCTGCAATAAAACAACTATTTTCTTTCTATTGCTGAATAAGGAAAATGCAGAGTCAGAATTGCGTGCACATAGCAGCTCTGTTAGGGGAAATAAGATACCGGATAAGGCTCCTGAAGAAAATATGGGAAAAACTGTAAAGTTTCAACCTTTTGTCAAAGAAGAGGCCTTAGTTGGTATATATAATGATGTTTTCCCTTCCAAGGCTGAGCAGTTCTTTAACTTGTTATTTATCAATGATTCTAAATTTACGAGCGAGTATCGTTCAGTACGAAAGGATACTAATCTGGTGATGGGACAGTGGCATACAGCAGATGAATATGATGGTCAAGTCAGAGAAATAACCTTCAGATCTCTTTGTAACAGTCCTATGTGCCCTCCAGACACTGCCATGACAGAGTGGCAACATGTGTTTGAAACCGTCCAACAGGCACATGATGTACCATTTGGGTCCTATTTTGAGGTGCATTGTAAATGGAGTTTGGAGACAATTAACGAAAGTTCAAGTACATTGGACATAAAAGTGGGTGCGCACTTTAAGAAATGGTGTGTGATGCAATCTAAAATCAAGGCAGGGGCAGTCAATGAGTACAAGAAAGAAGTTGATGTGATGTTAGAAGTTGCCCGATCTTATGTAGAGAACAGCGCTGCCGGTGGTGAGATTGACACAGCGGTTTCACCCCCGCCAACTTCTGACAGCTCGTAA 1542 0.4112 MMDLALDFLVPSLWEIKVTVATSMFVIIAYWFFTYRTGDFDVDRVLVDNSGDASEDKDKIAQFKGDSQTNSAYLIKLELLAAKNLIGANLNGMSDPYAIITCGNEKRFSSMVPGSRNPMWGEEFNFSVDELPVQINITIYDWDIIWKSAVLGSVTVPVEKEGQTGAVWMNGYGVTSTRRRMPTEKQGPTVVHQKPGPLQTIFNLLPDEVVEHSYSCALERSFLYHGRMYASALRRVRYKFASFWNRNHTFRNLQRAAKIFREMLEAEKKVAPAPFDVLNLCNKTTIFFLLLNKENAESELRAHSSSVRGNKIPDKAPEENMGKTVKFQPFVKEEALVGIYNDVFPSKAEQFFNLLFINDSKFTSEYRSVRKDTNLVMGQWHTADEYDGQVREITFRSLCNSPMCPPDTAMTEWQHVFETVQQAHDVPFGSYFEVHCKWSLETINESSSTLDIKVGAHFKKWCVMQSKIKAGAVNEYKKEVDVMLEVARSYVENSAAGGEIDTAVSPPPTSDSS 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0018 513 PANTHER BAG-ASSOCIATED GRAM PROTEIN 1 169 232 IPR044655 -
Lele29g0018 513 ProSiteProfiles C2 domain profile. 56 171 IPR000008 -
Lele29g0018 513 Gene3D - 197 234 IPR011993 -
Lele29g0018 513 PRINTS C2 domain signature 114 127 IPR000008 -
Lele29g0018 513 PRINTS C2 domain signature 90 102 IPR000008 -
Lele29g0018 513 PRINTS C2 domain signature 135 143 IPR000008 -
Lele29g0018 513 ProSiteProfiles VASt domain profile. 335 495 IPR031968 -
Lele29g0018 513 Pfam C2 domain 76 169 IPR000008 -
Lele29g0018 513 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 73 174 IPR035892 -
Lele29g0018 513 CDD C2 75 168 - -
Lele29g0018 513 Gene3D C2 domain 57 181 IPR035892 -
Lele29g0018 513 Pfam VAD1 Analog of StAR-related lipid transfer domain 339 474 IPR031968 -
Lele29g0018 513 SMART C2_3c 74 170 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0018 Lele-ChrLele29 126387 136203 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0018 94 159 C2H2 Transcription Factor Family AT4G21160 28.788 5.33e-06 46.6