Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g2124 ATGAGTTGCTTCCCGTGTTGTGCATCGAAAGAAAGGATCAACAGGAAGGCATTGCAGAAGAGCAGCAAGGAGTACCATGCTTCAAAATCTATAGCCTCATTTGCCAACATTTCTTTTAAAAGTGATGCCAGCAGGCAAAGGTACATAACGGAAGAAATCAAGAAGATTGGAAAAGGAAATATTACTGCTAAAATCTTCAGCTATCGAGAGCTGTGTGTTGCAACCCAGAATTTTCACCATGAAAACCTAGTTGGTGAAGGAGGCTTTGGCAGGGTATACAAAGGATATCTCGGAAGCACGAATCAAGTTGTTGCGGTGAAGCAACTTGATAGGAATGGATTCCAAGGAAACAAAGAATTTCTTGTAGAGGTTTTGCTTTTGAGTCTCTTGAGCCACCCCAACCTCGTCAATTTGGTAGGTTATTGTGCTGATGGTAATCAGAGAATTTTGGTCTACGAGTACATGGTCAATGGTTCTTTAGAAGATCACCTTCTTGAATTAACTGATGAAGATAGAAAGCCGTTGGATTGGAGTGTCAGAATGAAAATTGCTCAAGGTGCAGCGAGAGGACTTGAATATTTACATGAGGTAGCAAACCCGCCGGTGATATACAAGGATTTCAAGGCATCAAACATCCTATTGGATGAAGAATTTAATCCAAAACTCTCTGATTTTGGACTCGCAAAACTTGGTCCAACTGGAGAACACTTTCATGTGTCCACAAGAGTGATGGGAACTTATGGCTATTGTGCTCCTGAGTATGCATTCACAGGACAGCTGAGTACTAAATCAGATGTATACAGTTTTGGAGTTGTTTTCTTGGAAATGATATCGGGAAGAAGAGTGATTGATCATTCAAAGCCAACTGAAAAGCAAAATTTAGTCCTTTGGGCGCAACCACTATTGAAAGACAAAAGAAAGTTCACTTCAATCGTTGATCCATTACTAGAAGATGATTACCCCATAAAGGGTCTGCACCAAGCTCTAGCAGTTGCAGCAATGTGTCTCCAAGAGGAAGCTTCTACTCGGCCTTTGATTAGCGACGTAGTCTCCGCTATGGAGTTCCTGTCCAAGAAGAATGTGAAAGGTGATGATGAAGAAAATGATGAACATATTTTTGACTCTTCTACTGAGGAGGATGACGACGGGGACTGCAGAATTGGAGGCTATGAATCTGATAGCATACTTGATCTCAAGAAACAAGATTAA 1209 0.4119 MSCFPCCASKERINRKALQKSSKEYHASKSIASFANISFKSDASRQRYITEEIKKIGKGNITAKIFSYRELCVATQNFHHENLVGEGGFGRVYKGYLGSTNQVVAVKQLDRNGFQGNKEFLVEVLLLSLLSHPNLVNLVGYCADGNQRILVYEYMVNGSLEDHLLELTDEDRKPLDWSVRMKIAQGAARGLEYLHEVANPPVIYKDFKASNILLDEEFNPKLSDFGLAKLGPTGEHFHVSTRVMGTYGYCAPEYAFTGQLSTKSDVYSFGVVFLEMISGRRVIDHSKPTEKQNLVLWAQPLLKDKRKFTSIVDPLLEDDYPIKGLHQALAVAAMCLQEEASTRPLISDVVSAMEFLSKKNVKGDDEENDEHIFDSSTEEDDDGDCRIGGYESDSILDLKKQD 402
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g2124 402 SUPERFAMILY Protein kinase-like (PK-like) 61 356 IPR011009 -
Lele28g2124 402 MobiDBLite consensus disorder prediction 370 386 - -
Lele28g2124 402 PANTHER OS07G0668900 PROTEIN 3 362 - -
Lele28g2124 402 ProSitePatterns Serine/Threonine protein kinases active-site signature. 202 214 IPR008271 GO:0004672|GO:0006468
Lele28g2124 402 FunFam Serine/threonine-protein kinase PBS1 155 371 - -
Lele28g2124 402 Pfam Protein kinase domain 78 351 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g2124 402 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
Lele28g2124 402 FunFam Serine/threonine-protein kinase CDL1-like 49 154 - -
Lele28g2124 402 MobiDBLite consensus disorder prediction 360 390 - -
Lele28g2124 402 Gene3D Phosphorylase Kinase; domain 1 49 154 - -
Lele28g2124 402 Gene3D Transferase(Phosphotransferase) domain 1 155 382 - -
Lele28g2124 402 ProSiteProfiles Protein kinase domain profile. 78 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g2124 402 CDD STKc_IRAK 84 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g2124 Lele-ChrLele28 24117928 24121178 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g2124 1 356 Glycoside Hydrolase AT3G07070 61.496 4.15e-157 447
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-1 Lele28g2124 Pkinase 1.8e-46 CL0016