Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g2105 ATGACGATATTCGATGACATGGCCTTTTCGGACGGTCTGGATATCATAGCTGCTCCGTTTGGGGAAGGCACTAGCTCCGCCCAGCCATCTGAACCAAATTCGACAATGGAGGACGATGACAGTGACGATGATGAAGACCTCGATGAGGATGAGCTTGAGAGGAGGATCTGGAAGCACAAACTCCAGCTGAAGCGCCTAAGAGAGCAAGGCAGAGCAAGAGAACATGGAATTGAACTCTCCAGGCAAAGGCAACAAAATACTGAAGAACAGGCTAGGAGGAAGAAGATGGCCAGAGCTCAAGATGGAATCTTGAGGTACATGCTCAAGATGATGGAGGTTTGCCAGGCTCAAGGCTTCGTGTACGGCATCATCCCTGAGAATGGAAAACCCGTCACCGGAGCTTCAGACAACCTCCGTGAGTGGTGGAAGGATAAAGTCAGATTTGATAGGAACGGCCCCGCGGCCATCACCAAAGATCGGGCAGAAAGCCTTGCCAGCAAGAGCAGTGGGCTGAATGCCGGGGCTCCAACTCCTTGCACTTTGCAACAGATTCAGGACACAACCCTGGGCTCTCTCTTGTCAACTCTGATGCAGCACTGTGATCCCCCTCAGAGGCGATACCCATTGGAGAAGGGTGTTGCACCGCCGTGGTGGCCGACGGGGAGCGAAGAATGGTGGACCCAGATCGGGATCTTGGAGGCAGCCATTTTAAAACTGGAGGATCGCCGGAAGCGAGACAGCTATGATATGAACACACCCAAAGTAGACAGAATGAAGGGAGGCTTGTCACTGCAACCAATGAAGAGGAAGATTCATACTGAGTTCAACAACACAATGATTATGAAGGAAGCACAGATTTTCACATGTGAACACCGCCTGTGTCCTTACAGCGAATCTCGTGTTGGTTTTCCAGACAGGATTTCTAGGGACAACCATCAGCTCCAGTGTCCTTACAAAAGCTTTAGTTCAACCTCAATCTGTTACCTTGGCTCTTCCAGCACCACCAACGCAACTGCCGGCGTTCAGTATGTCCAGGCTCGGAGGAGTTTCGGACAACGGCCAGAGAAGGATGACTGA 1077 0.5135 MTIFDDMAFSDGLDIIAAPFGEGTSSAQPSEPNSTMEDDDSDDDEDLDEDELERRIWKHKLQLKRLREQGRAREHGIELSRQRQQNTEEQARRKKMARAQDGILRYMLKMMEVCQAQGFVYGIIPENGKPVTGASDNLREWWKDKVRFDRNGPAAITKDRAESLASKSSGLNAGAPTPCTLQQIQDTTLGSLLSTLMQHCDPPQRRYPLEKGVAPPWWPTGSEEWWTQIGILEAAILKLEDRRKRDSYDMNTPKVDRMKGGLSLQPMKRKIHTEFNNTMIMKEAQIFTCEHRLCPYSESRVGFPDRISRDNHQLQCPYKSFSSTSICYLGSSSTTNATAGVQYVQARRSFGQRPEKDD 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g2105 358 Gene3D - 176 240 IPR023278 GO:0003700|GO:0005634
Lele28g2105 358 Gene3D - 85 166 IPR023278 GO:0003700|GO:0005634
Lele28g2105 358 MobiDBLite consensus disorder prediction 35 50 - -
Lele28g2105 358 MobiDBLite consensus disorder prediction 19 50 - -
Lele28g2105 358 Pfam Ethylene insensitive 3 50 237 IPR006957 GO:0005634
Lele28g2105 358 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 31 233 IPR006957 GO:0005634
Lele28g2105 358 MobiDBLite consensus disorder prediction 68 90 - -
Lele28g2105 358 SUPERFAMILY DNA-binding domain of EIN3-like 179 232 IPR023278 GO:0003700|GO:0005634
Lele28g2105 358 Coils Coil 49 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g2105 Lele-ChrLele28 23932233 23933707 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g2105 268 319 EIL Transcription Factor Family AT3G20770 48.077 1.73e-07 51.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Lele28g2105 EIN3 8.9e-90 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g2052 25 27844134 27845463 Lele28g2105 28 23932233 23933707 hybridization
Lele26g2105 26 24073205 24074949 Lele28g2105 28 23932233 23933707 hybridization