Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g2097 ATGCCACGAATGGCTCCGGTGTCCCTTAAGCGAGATGATGTTCCATCTGACAGCATGGTATGTAGAAAGGTGGTTCTCCCCTGTCTGAAATCAATGACTTGGGTAATGGAGAACAAAAATTCAACTCCTGGGAATAGAGTAGCTGTTATCAATTTGAAGCTGCAAGATTACAGCAGGACTCCATCAGCAGAATCTGAAGTGAAGTTCCAGCTCTCAAGAGTTTCTTTGGAACCAATGTTGAGGTCTATGGCCTACATCAGTGAGCAGCTCTCAACACCAGTTAATAAGGTTGCTGTAATAAATCTCAAGCTTCAAGATACTGAGACAACTTCTGGGGAGTCTGAAGTGAAGTTTCAGGTGTCCAGGGACACATTGGATGCCATGTTACGATCAATGGCTTATATTCGTGAGCAACTCTCTCATGCTGGAGACACAGAGTCAGAGCCTGTATGGAAAAGGCAACGAAAATAA 471 0.4416 MPRMAPVSLKRDDVPSDSMVCRKVVLPCLKSMTWVMENKNSTPGNRVAVINLKLQDYSRTPSAESEVKFQLSRVSLEPMLRSMAYISEQLSTPVNKVAVINLKLQDTETTSGESEVKFQVSRDTLDAMLRSMAYIREQLSHAGDTESEPVWKRQRK 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g2097 156 PANTHER COMM DOMAIN-CONTAINING PROTEIN 9 92 144 IPR037360 -
Lele28g2097 156 Pfam COMM domain 88 135 IPR017920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g2097 Lele-ChrLele28 23889099 23891256 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele27g0034 27 263503 265770 Lele28g2097 28 23889099 23891256 ECH
Lele28g2097 28 23889099 23891256 Lele28g2097 28 23889099 23891256 ECH
Lele25g2045 25 27799389 27803838 Lele28g2097 28 23889099 23891256 hybridization
Lele26g2098 26 24019228 24021466 Lele28g2097 28 23889099 23891256 hybridization