LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele28g2081	ATGGAATCCGGATTTGGGTTTCTTGTTCTCTTCTCTGTCTTTACGTTGGCTTCCATGTTTGTAAGCGCCAAATCACAGTGTAGCGAGACTTGTGATTTCGCTCTTGGTTCGTACTATGTTTGGAATGGTTCAAACCTCACTTACATTTCGAAGGTTCTGAAATCCCAGCTTGTTTCAACCCCAGACGATATTGTCAGCTACAACAAAGACAAAATACCCAATCAAGACAGCGTTTCGGCATTCATAAGAGTCAACGTTCCCTTCCCATGTGAGTGCATCAATGGTGAATTTTTAGGCCACACGTTTCAATATGATGTTCAGTCAGGGGACACCTACGAGAAGGTTGCTGTCACAAACTATGCCAATTTGACCACTGTTGATTGGCTGCAGAAGTTCAATAGCTACCCATCCGACAATATTCCTGACACTGGAACCTTAAATGTCACGATTAACTGTTCCTGCGGGAATAGAGACGTCTCTACGGATTATGGGTTGTTCATCACGTACCCACTTAGGCCTGGGGAGACCTTGCAGTCAGTGGCAAGCGATGTGGGTCTTGACACCGTACTACTGCAGAGGTACAACCCGTCTGTGAATTTTAACCAAGGAAGTGGTCTGGTTTTTATTCCGGGCAAAGATCAAAATGGTACCTTTGTGTCGCTTCGGTCAAGAAAAGCTGGAGGTCTTTCCACGGGGGCTATAGTTGGAATATCCATTGGAGTAGTAGCAGGGCTTCTTCTACTGGCAGTTGGTATATATCTTGGCTATTTTAGAAAGAGTAAGACGGATGAGGTGAAATTACTCTCCCAAGAGTCCAAAGGTCTCTCTTCTCAGGATAGGAAGGATACAACCTTCGGTAATGTTGAAAATGGAACTTCTGGATCTGGTGGTCCTGTTGCTCCTATTGCTGGCCTTGCTGGCATTACAGTGGACAAATCAGTGGAGTTTTCATATGAAGAACTTGCTACTGCGACAAACAACTTCAATATGGCTAACATTATTGGTCAAGGTGGTTTTGGTGCTGTCTACTATGCAGAGCTGAGAGGCGAGAAAGCAGCAATCAAGAAGATGGATATGCAGGCAACAAGAGAATTTCTGGCTGAATTGAAAGTCCTGACAAATGTTCATCACCTTAATTTGGTGCGTTTAATCGGCTATTGCGTTGAGGAATCTCTTTTCCTTGTCTATGAGTACATTGAGAATGGAAACTTAAGTCAGCATCTCCGAAGTTCAGGAAGAGATCCACTGCCTTGGTCTACCAGGGTGCAAATTGCTCTGGATTCAGCAAGAGGTCTTGAATACATTCATGAGCATACAGTGCCTGTATATATCCATCGCGACATAAAGTCGGCTAATATATTAATAGACAAAAACTTCCGTGGCAAGGTTGCAGATTTTGGATTGGCTAAACTTACTGAAGTTGGCAGCGGGACACTTCCCACTGGTCGTCTTGTGGGTACATTTGGATATATGCCACCAGAATATGCTCAATATGGGGATGTTTCTCCCAAAATAGATGTCTATGCTTTTGGAGTAGTTCTCTATGAACTTATTTCTGCTAAGGAAGCTATCATCAAGATAAATGAATCAATCACAGACTCAAAGGGCATCGTATCTTTGTTTGATGGAGTTCTTAATCAGCCAAATGCAATCGAAGATCTTCGCAAATTGGTGGACCCAAGACTTGGGGATGACTACCCTATTGATTCAGTTCACAAGGTTGCTCAACTTGCCAATGCATGCACGCAGGACAATCCCCAACTGCGGCCAAGCATGAGATCTATCGTTGTTGCTCTTATGACACTTTCCTCTGCCACTGAGGATTGGGATGTTGGCTCCTTTTATCAAAATCCAGCTCTTATGAATCTCATGTCTGGAAGATAA	1884	0.4363	MESGFGFLVLFSVFTLASMFVSAKSQCSETCDFALGSYYVWNGSNLTYISKVLKSQLVSTPDDIVSYNKDKIPNQDSVSAFIRVNVPFPCECINGEFLGHTFQYDVQSGDTYEKVAVTNYANLTTVDWLQKFNSYPSDNIPDTGTLNVTINCSCGNRDVSTDYGLFITYPLRPGETLQSVASDVGLDTVLLQRYNPSVNFNQGSGLVFIPGKDQNGTFVSLRSRKAGGLSTGAIVGISIGVVAGLLLLAVGIYLGYFRKSKTDEVKLLSQESKGLSSQDRKDTTFGNVENGTSGSGGPVAPIAGLAGITVDKSVEFSYEELATATNNFNMANIIGQGGFGAVYYAELRGEKAAIKKMDMQATREFLAELKVLTNVHHLNLVRLIGYCVEESLFLVYEYIENGNLSQHLRSSGRDPLPWSTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLAKLTEVGSGTLPTGRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVLYELISAKEAIIKINESITDSKGIVSLFDGVLNQPNAIEDLRKLVDPRLGDDYPIDSVHKVAQLANACTQDNPQLRPSMRSIVVALMTLSSATEDWDVGSFYQNPALMNLMSGR	627

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele28g2081	627	MobiDBLite	consensus disorder prediction	269	296	-	-
	Lele28g2081	627	MobiDBLite	consensus disorder prediction	269	294	-	-
	Lele28g2081	627	FunFam	LysM receptor kinase 2	307	398	-	-
	Lele28g2081	627	FunFam	PTI1-like tyrosine-protein kinase 3	399	613	-	-
	Lele28g2081	627	SMART	serkin_6	328	601	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele28g2081	627	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	443	455	IPR008271	GO:0004672\|GO:0006468
	Lele28g2081	627	Gene3D	Phosphorylase Kinase; domain 1	305	398	-	-
	Lele28g2081	627	ProSiteProfiles	Protein kinase domain profile.	328	602	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele28g2081	627	Pfam	Protein tyrosine and serine/threonine kinase	330	598	IPR001245	GO:0004672\|GO:0006468
	Lele28g2081	627	SUPERFAMILY	Protein kinase-like (PK-like)	312	599	IPR011009	-
	Lele28g2081	627	PANTHER	CHITIN ELICITOR RECEPTOR KINASE 1-RELATED	10	613	IPR044812	GO:0019199\|GO:0045087
	Lele28g2081	627	ProSitePatterns	Protein kinases ATP-binding region signature.	334	356	IPR017441	GO:0005524
	Lele28g2081	627	Gene3D	Transferase(Phosphotransferase) domain 1	399	614	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele28g2081	Lele-ChrLele28	23774356	23779394	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele28g2081	13	627	Receptor kinase-like Gene Family	AT3G21630	58.548	0.0	717

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LysM	Lele28g2081		PK_Tyr_Ser-Thr	9.6e-46	CL0016