Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g2076 ATGTCGGATGACATGCTTGTGCATTTCTCGTCCAATTCATCCAACCAATCGGATCAGTCCTTGCCTACCAAGATTGCAAAGCTTGAAGCTCGAATGGTCGGCAAGGCTTCGCCCGCAGTTGCCACCACTCCGTCATCTGTTCAGCAGTCAACTTGGTCTGCTGTTCCTTCAGCTGCGAAATTTGGGGGACCTGCCGAGGATCTGGCTGGACCCTCCACTTCGAGTGATTCCGATGATGATAACGGTGGGGAATTCCTTATACAAGCTAACACACAGAAGCGCCAAAAACTTCAAAAAGATGACCACTCAAAGATTTTTGAACATGTTGAGGTAGTTACCGATGGAAGGCAGACTAGTTTGGATGCTGTGGAGGCAAAAGTTAGTGCTGATGTGAATAGGAAAAAAAATGGTCGTGGAAGAGGGAGTTCTGGTAATGGTAGGGGACGTTGTTCCAGAGTTACTGATCAGACCAGAACACAAATTTCTCCTCCAGTCGTTTTGGCCTCCAATGGTCAGCTTGACAATGCATGCCATAGGGAGGGAAGACTCAAAGATCAGATTCGCAGTGACAATGGCACCTCATTAGAGGAGGAGAATGCGTCTTTGCGTGCAAAATTTGTTGCATTGGAGGAGGACCTGAGGAAATCAAAACAAGAGATGTCCGATTATCAGAACCTTTGTCGCCAGTTAGAAAAGGAACTAAAGGACCTGAAAGATCACGAACAGCAAATGAAGCCCAAGAGGACAAAAATAATATCTGATTTGCTTATGTCAGTTTCAAAGTCTGAGAGGCAAGAAGCACGGTTGAAAGTACGACAAGACTCATTGAGACTAGGGAATGTTGGTGTAATAAGAGCGGGAACTGTCATATCCGAGACTTGGGAAGATGGGCAAGCATTGAAGGATCTTAATGCCCAACTTCGAGGTTTACAAGGGAAGGATCTTGATGCTGTCCTTAAGGCAACACCTGTATTGCCTGAGAGAGAGTCAAGGCCTGGAAATGTTTTGTTTGATGAGCTTGGCATTGCCAAAGTGACTGATTTTGGTCTCAGCAAAATAGTTGAGGATGATGTGGGATCCCAGGGTATGGAACTAACGTCTCAAGGGGCTGGAACTTACTGGTATTTGCCACCAGAATGCTTTGAGCTCAGTAAGACACCTCTTATATCATCGAAGGTTGATGTCTGGTCTGCCGGTGTTTTATTCTATCAAATGCTCTTTGGAAGACGTCCATTTGGCCACGACCAAACTCAAGAGCGTATACTACGAGAAGATACAATTATTAAGGCTCGTAAGGATTTTATACGGCGATGTCTGACATATGACCAGGCCGAGCGACCAGATGTATTGAGCATTGCTCAAGACCCATATCTTACCTACTCAAAGAAGTAA 1392 0.454 MSDDMLVHFSSNSSNQSDQSLPTKIAKLEARMVGKASPAVATTPSSVQQSTWSAVPSAAKFGGPAEDLAGPSTSSDSDDDNGGEFLIQANTQKRQKLQKDDHSKIFEHVEVVTDGRQTSLDAVEAKVSADVNRKKNGRGRGSSGNGRGRCSRVTDQTRTQISPPVVLASNGQLDNACHREGRLKDQIRSDNGTSLEEENASLRAKFVALEEDLRKSKQEMSDYQNLCRQLEKELKDLKDHEQQMKPKRTKIISDLLMSVSKSERQEARLKVRQDSLRLGNVGVIRAGTVISETWEDGQALKDLNAQLRGLQGKDLDAVLKATPVLPERESRPGNVLFDELGIAKVTDFGLSKIVEDDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGVLFYQMLFGRRPFGHDQTQERILREDTIIKARKDFIRRCLTYDQAERPDVLSIAQDPYLTYSKK 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g2076 463 Gene3D Transferase(Phosphotransferase) domain 1 328 463 - -
Lele28g2076 463 MobiDBLite consensus disorder prediction 126 159 - -
Lele28g2076 463 SUPERFAMILY Protein kinase-like (PK-like) 331 459 IPR011009 -
Lele28g2076 463 MobiDBLite consensus disorder prediction 70 84 - -
Lele28g2076 463 PANTHER MIXED LINEAGE PROTEIN KINASE 11 310 - -
Lele28g2076 463 MobiDBLite consensus disorder prediction 1 23 - -
Lele28g2076 463 MobiDBLite consensus disorder prediction 39 56 - -
Lele28g2076 463 SMART serkin_6 223 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g2076 463 Coils Coil 192 243 - -
Lele28g2076 463 MobiDBLite consensus disorder prediction 1 84 - -
Lele28g2076 463 Pfam Protein kinase domain 332 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g2076 463 ProSiteProfiles Protein kinase domain profile. 139 458 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g2076 Lele-ChrLele28 23717124 23723794 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g2076 319 427 Receptor kinase-like Gene Family AT5G35380 28.182 1.49e-11 64.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Lele28g2076 Pkinase 9.5e-22 CL0016