Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g2010 ATGGAAGCAAGCAAAGAGGAGGCGCTTAAAGCAATAGAGATTGCTGAGAAGCGATTTGCTCAGAGAGACTTTGCAGGTGCCAAAAATTATGCATTAAAGGCAAGAGCAATATGTCCTGAATTGGAGGGAATACCTCAAATGGTGGCCACATTTCAAGTTTATGTAGCTTCTGAGGCAAAACATAATGGTGAACTAGATTATTATTCAATTCTTGGAACAAAACCTTCAGCAGATAAAGAGACAGTTAGGAAGAAGTATAGGAAGTTGGCCGTGTTACTTCACCCGGATAAGAACAAATGTGTGGGATCTGATGGGGCTTTTAAGCTTGTATCTGAAGCATGGACTTGGCTATCAGATAGTGCTATGCGAAGTTCTTATGATCTCAAGAGAAATGCCCAATTGATTGCCGGGGTCAATCAGACTAATTTGTCGTCAGTCTATTCTGCAGGAACTACAGGTTATAACAAATGTTTCAATTTGCAAACTTCTCATGGTAGGCGAGATACTTTCTGGACTATTTGCACCTCTTGTCAAGTCCAGTATGAGTATTTGCGTAAGTATGTGAATAAGAAACTTTCATGTAAGAACTGTCGGGGAACTTTCATTGCCATTGAAACTGGGGCAGCCCCAGCAAATGGTTCTTTCCCTTATACTCCTTGGTCACATGTGCCAGGCAATAGGTATGGTTGTCATTCATTTGATAACGTCACATATTTGCCTACTAGTACTACCTATTTCAATGGCAATGGGGTCACTGGATATCATTCTCCAGATGGATATGAGTATGTTTCAAATGTTTCATTCCAGTGGAGCCCTGCTGGACATGTCAACGGAAATGGTTCAACTACCCTATCCTCTGATTCTGGCTGTAAGGTCAATGGAAATAGGAAGAGAGGAAGGCCAATAATTAAATCAGCAGTCGATCAGAGGCATCAATTAGCAGACATTGCGCCCAATGTAAATTCAGATGTATCATTATACTGTAATGAACCTCAAGAAATTAAACCCACTAGACCTGATAAAAAAAGGAAAATTGTTGTGGCAGCCAGTTTCCGAAATGGCTATGAACAAAAGGAATTGAAATTTGCTTCTGAATCAAGATTGGCTGATGGGAATGAAAGCATTGTGCATGACCAGAAACTTTCTTGCGCAAGTGAAGTTCAAACTAAGCAGTGTTCCATGGCCCCTGCATTTGATGGGAGAAAATTACTGATTGAGAAGGCCAAGACAGATATTCGGAAGAAACTGGAAGAGATGAAATTGGCATCTGACGCTGCTGTTGTTGGGGAGAAAGCAAAATCTCAAGCAGAAGTTGGTCAAGTGAATGGAGAGGAATATAGAAGAGCAGGTCTAAGTGTTTCTGACCATCAATTAGAATATAGGAAAACTGCTTCTGTCACAATAACTGTCCCGGATTCTGACTTCCATGACTTTGATAAAGACAGGTCAGAGCAATGCTTCAGGCCAAAGCAAATATGGGCTTTATATGATGAGGAAGATGGAATGCCTCGTTTATATTGTCTAATCCGTGAGGTCATCTCTGTCCATCCATTTAAGATTCATATTAGTTATTTGAACTCAAAAACTGATAGTGAGTTTGGCCCAGTGAACTGGATGGATTCTGGTTTTACCAAATCTTGTGGAAATTTCAGGGCATACAATTCTGATATTGTTGACCAGGTTAATATTTTCTCTCATGTTCTAACGCGGGAGAAGGCTGGTCGAGGTGGTTGTATTCGCATATACCCTAGATGTGGAGATATTTGGGCTGTTTATCAAAATTGGTCTCCAGACTGGAACTGGTCGACTCCGGATGAAGTGAGGCATCGTTATGAAATGGTAGAGGTTCTTGATGATTACTCTGAGGATCTTGGTGTTTGTGTTAGTCCCCTTATAAAGCTGGCTGGATTTAAAACAGTATATCAAACAAATACAGACAAAAAAGCTGTTAGATGGATACCAAGAAGAGAAATGTTGCGCTTTTCACACCAAGTGCCTTCTTGGTTGCTGAAGGGAGAGACAAGCAATTTGCCAGAAAGGTGTTGGGATCTTGATCCAGCAGCAACTCCTGATGAACTTCTTCATGCTGCTACAATCACGAATGCTTCATAG 2112 0.4096 MEASKEEALKAIEIAEKRFAQRDFAGAKNYALKARAICPELEGIPQMVATFQVYVASEAKHNGELDYYSILGTKPSADKETVRKKYRKLAVLLHPDKNKCVGSDGAFKLVSEAWTWLSDSAMRSSYDLKRNAQLIAGVNQTNLSSVYSAGTTGYNKCFNLQTSHGRRDTFWTICTSCQVQYEYLRKYVNKKLSCKNCRGTFIAIETGAAPANGSFPYTPWSHVPGNRYGCHSFDNVTYLPTSTTYFNGNGVTGYHSPDGYEYVSNVSFQWSPAGHVNGNGSTTLSSDSGCKVNGNRKRGRPIIKSAVDQRHQLADIAPNVNSDVSLYCNEPQEIKPTRPDKKRKIVVAASFRNGYEQKELKFASESRLADGNESIVHDQKLSCASEVQTKQCSMAPAFDGRKLLIEKAKTDIRKKLEEMKLASDAAVVGEKAKSQAEVGQVNGEEYRRAGLSVSDHQLEYRKTASVTITVPDSDFHDFDKDRSEQCFRPKQIWALYDEEDGMPRLYCLIREVISVHPFKIHISYLNSKTDSEFGPVNWMDSGFTKSCGNFRAYNSDIVDQVNIFSHVLTREKAGRGGCIRIYPRCGDIWAVYQNWSPDWNWSTPDEVRHRYEMVEVLDDYSEDLGVCVSPLIKLAGFKTVYQTNTDKKAVRWIPRREMLRFSHQVPSWLLKGETSNLPERCWDLDPAATPDELLHAATITNAS 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g2010 703 CDD DnaJ 66 119 IPR001623 -
Lele28g2010 703 SUPERFAMILY Chaperone J-domain 63 137 IPR036869 -
Lele28g2010 703 Pfam DnaJ domain 66 127 IPR001623 -
Lele28g2010 703 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Lele28g2010 703 SMART dnaj_3 65 122 IPR001623 -
Lele28g2010 703 PANTHER BNAC03G44070D PROTEIN 1 690 - -
Lele28g2010 703 Pfam Domain of unknown function (DUF3444) 467 673 IPR024593 -
Lele28g2010 703 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lele28g2010 703 PRINTS DnaJ domain signature 68 86 IPR001623 -
Lele28g2010 703 PRINTS DnaJ domain signature 86 101 IPR001623 -
Lele28g2010 703 Gene3D DnaJ domain 53 149 IPR036869 -
Lele28g2010 703 Coils Coil 405 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g2010 Lele-ChrLele28 23211421 23213532 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g2010 4 301 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.368 1.39e-27 113