Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g2005 ATGTCTTCCTCCTCCTCCTCGTCCTCCTCCTCCTCTCGTGACTCTCCCATTATTCATCACCATAATGCTGGTGCTGCTGATCCTGGCCCTAGCTCATCATCAAGAACAATCGTCTCCGATTCCGACGAGCCCTCTTCGTCTCGTCCGCGTCGTGCCATGAATGATGTCTGGCCTGATCCTTTTCTTGAAGACTTAACCGTCCAAGTCGCCATTGATGCTTCTCTCTCTTCCGGTCGTCTTTCTGCAGCTCCGGCACTCGCCAACTTGTTTCAGGTTTGTTCGAGGTGGCAGGCTGTTTCACGGTCGGATCGCCTGTGGCAGCGGCTCACCGAAGAGATATGGCGGCGAACAACTCAAGCGCGAGACACTTGGTACGAAGAGTTCATTCACCGACATCGAATCGCCAGGAATTTCGCCGTCGGCAGATACGCTTATTCCTCCTTACAGTTTGGCCCGTCGGACATGGATGACGACCACTACGCCAGCGTCATCTGCCGCTGTCTCACCCTCTCCGACGACTATCTCGCCTGTGGCTTCACCGACGGCACTGTCCGTCTCTTCCACCTCGATACTCGCGTCCACTTCAGGACTTACCGGACCCACCAAACCAACCGTTTAGGTCCCTTCGCGAGATCCGTGTCGGGCATCGTGATGGCCGACAGCAGGCTCGCCTTCGCCACGCTGGACGGGGACATCTACGTGGCACACCTCGACGAGGCCGCCGATCACCCACGTAGGGCCCGCATCGCTGACGTGGTCAACAGCGGGGTCCTCGTAGAGTTCGCTGGACGTGGCCGCTGGTGGGTCGGACTCTTCGCCGGAGTTCCTGGCCAGGCGTTTCAGATTTGGGACGCTGAAAACGAACAACTGGTGTTCATTGGCGGATCCTTGACCGACCCGGAAACCGTCATGGGTTGGCACATGTTGACGGAGTTTGTCGAACCGGTGGGTCGTGTTCGGGTCACGGACGGAGGCTTGGCGGTGGCGTGTACGAGCTCACAACTCATAGTGTTCGACCTGAACAACCAGATTCTTTTGCATGAGCTCTGGTCCTTTGCGGGCGGCTTCATTGTGACATCGATGGACGTGAGCCATGAGGCGTTGTTTATCGTGGAAAGGAACGGCGACGCTAAGGTGCGCCATGCGAGCACATTAGAGCAAATATGTGAATTCCGGACACGTCCGGTTAGGGGTTTGTTGGGGTGTAAGAACATGGGGTACGCGCTAACATGCGCCGGGGTTGTGGTGAGGGTATGGGATGTTGAGCGACGGCGGGGTCGACGGTGTATGGTGTTGGGAGAGAAGGTTGGGGCGGCGATTGCCATGGTGTGCAACGAGAGGCACGTGGCCATATCTTGTAATGACAGGTCGATACACCTGTGGGATTTCGATGTATAA 1398 0.5701 MSSSSSSSSSSSRDSPIIHHHNAGAADPGPSSSSRTIVSDSDEPSSSRPRRAMNDVWPDPFLEDLTVQVAIDASLSSGRLSAAPALANLFQVCSRWQAVSRSDRLWQRLTEEIWRRTTQARDTWYEEFIHRHRIARNFAVGRYAYSSLQFGPSDMDDDHYASVICRCLTLSDDYLACGFTDGTVRLFHLDTRVHFRTYRTHQTNRLGPFARSVSGIVMADSRLAFATLDGDIYVAHLDEAADHPRRARIADVVNSGVLVEFAGRGRWWVGLFAGVPGQAFQIWDAENEQLVFIGGSLTDPETVMGWHMLTEFVEPVGRVRVTDGGLAVACTSSQLIVFDLNNQILLHELWSFAGGFIVTSMDVSHEALFIVERNGDAKVRHASTLEQICEFRTRPVRGLLGCKNMGYALTCAGVVVRVWDVERRRGRRCMVLGEKVGAAIAMVCNERHVAISCNDRSIHLWDFDV 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g2005 465 Gene3D - 153 464 IPR015943 GO:0005515
Lele28g2005 465 Gene3D - 78 139 - -
Lele28g2005 465 MobiDBLite consensus disorder prediction 1 17 - -
Lele28g2005 465 MobiDBLite consensus disorder prediction 27 43 - -
Lele28g2005 465 MobiDBLite consensus disorder prediction 1 53 - -
Lele28g2005 465 SUPERFAMILY F-box domain 84 133 IPR036047 GO:0005515
Lele28g2005 465 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 158 464 IPR011047 -
Lele28g2005 465 PANTHER WD40 REPEAT PROTEIN 12, 37 15 423 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g2005 Lele-ChrLele28 23166724 23172948 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Lele28g2005 None None None