Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1984 ATGAAAACAGGGATTGTTGACGACGGCGATCCAGTAGCAGTGTCAGTGGCTATGGCAGGCGACCAGAACAATGTACTTAATGCCCTCGATGTCGCCAAGACGCAATGGTACCATTTCACTGCCATCGTCATCGCCGGCATGGGATTCTTCACCGACGCTTACGATCTCTTCAGCATCGCCAACGTTACCAAGCTGTTGGGTCGTATCTACTACACCAAAGAAGGGGCCGAGAAGCCGGGGAGTTTGCCGCCGAACGTGTCCATAGCCGTGAACGGCGTGGCTCTCTGTGGGACGTTGGCCGGTCAGCTTTTCTTCGGGTGGCTCGGCGATAAGATGGGGAGGAAGAGAGTGTACGGAATGACTCTCGCTCTTATGGTAATCTCCTCGTTGGCTTCTGGTCTGTCTTTTGGTAAATCCCCAAAAGGTGTCATCGCCACTCTCTGCTTCTTCCGATTCTGGCTCGGCTTCGGCATCGGGGGCGACTACCCTCTCTCAGCCACTATCATGTCGGAATACGCCAACAAGAAGACTCGTGGAGCATTCATTGCCGCCGTCTTTGCTATGCAAGGGTTTGGAATTTTGGTTGGAGGAATTGTTTCTCTGATAGTCGCCACAGCTTTCGATCATGCTTATAAGGCTCCAGCATACAGTGTGAACGCAAAAGCTTCTCTTCCGCCACAAGCCGACTACGTATGGCGCATAATTCTGATGTTTGGAGCCGTGCCCGCAGCAATGACCTTCTACTCGCGAGCGAAGATGCCGGAGACGGCGAGGTACACCGCTCTGGTGGCCAAGAACGCGAAACAAGCAGCCATGGATATGTCAAAGGTGCTCCAAGTCGAACTCGAAGCCGACGAGCCGCCCAAGTCATCATCGGAAGGAGACAACAACAGCTTCGGTTTGTTCAGTAAGGAATTTGCTCGTAGACATGGGCTTCACTTGGTCGGAACATGTACCACCTGGTTCTTACTCGACATTGCATATTACAGTTCGAATCTTTTCCAGAAAGATATTTATACAGCAGTTGGATGGCTTCCACCGGCGAAAGAAATGAACGCCATTCATGAAGTTTACAGAGTCGCAAGAGCTCAAGTACTCATCGCACTTTGCGGCACCGTGCCGGGATACTGGTTCACGGTGGCGTTTATAGACATATTGGGACGATTCTTTATCCAACTCATGGGTTTCTTCTTCATGACCGTCTTCATGTTCGCTCTTGCAATTCCCTACGATCACTGGACTAAGAAGGAAAACAGAGTAGGGTTCCTCGTGATGTATGCATTGACCTTCTTCTTCGCCAACTTCGGTCCAAACGCCACAACCTTCGTGGTGCCGGCCGAGATCTTCCCGGCGAGACTGCGTTCGACTTGCCATGGGTTGTCGGCGGCTGCAGGAAAGGCCGGAGCTATCGTGGGGGCGTTCGGGTTCTTGTACGCTGCACAGAGCAAGGACCCGAAGAAGACTGATGCAGGGTATCCAGCTGGGATTGGGATGAAGAATTCTCTGATAATGTTGGGTGTGATTAACTTTGTGGGGATGTTGTTCACTTTCTTGGTTCCAGAATCAAAGGGAAAATCGTTGGAGGAATTGAGCAGAGAAAATGAAGAAGAAGAAGGTGATCAGAATGCAATTACGGCTTCAAGAACTGTTAATCCAGTGTGA 1662 0.5096 MKTGIVDDGDPVAVSVAMAGDQNNVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFSIANVTKLLGRIYYTKEGAEKPGSLPPNVSIAVNGVALCGTLAGQLFFGWLGDKMGRKRVYGMTLALMVISSLASGLSFGKSPKGVIATLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIAAVFAMQGFGILVGGIVSLIVATAFDHAYKAPAYSVNAKASLPPQADYVWRIILMFGAVPAAMTFYSRAKMPETARYTALVAKNAKQAAMDMSKVLQVELEADEPPKSSSEGDNNSFGLFSKEFARRHGLHLVGTCTTWFLLDIAYYSSNLFQKDIYTAVGWLPPAKEMNAIHEVYRVARAQVLIALCGTVPGYWFTVAFIDILGRFFIQLMGFFFMTVFMFALAIPYDHWTKKENRVGFLVMYALTFFFANFGPNATTFVVPAEIFPARLRSTCHGLSAAAGKAGAIVGAFGFLYAAQSKDPKKTDAGYPAGIGMKNSLIMLGVINFVGMLFTFLVPESKGKSLEELSRENEEEEGDQNAITASRTVNPV 553
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1984 553 Coils Coil 527 547 - -
Lele28g1984 553 CDD MFS_PhT 42 523 - -
Lele28g1984 553 ProSiteProfiles Major facilitator superfamily (MFS) profile. 41 524 IPR020846 GO:0022857
Lele28g1984 553 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 38 528 - -
Lele28g1984 553 MobiDBLite consensus disorder prediction 527 553 - -
Lele28g1984 553 MobiDBLite consensus disorder prediction 527 542 - -
Lele28g1984 553 FunFam Inorganic phosphate transporter 1-6 37 545 - -
Lele28g1984 553 Pfam Sugar (and other) transporter 42 532 IPR005828 GO:0016020|GO:0022857|GO:0055085
Lele28g1984 553 SUPERFAMILY MFS general substrate transporter 27 533 IPR036259 -
Lele28g1984 553 TIGRFAM 2A0109: phosphate:H+ symporter 28 533 IPR004738 GO:0005315|GO:0006817|GO:0016020
Lele28g1984 553 Gene3D MFS general substrate transporter like domains 293 548 IPR036259 -
Lele28g1984 553 Gene3D MFS general substrate transporter like domains 37 283 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1984 Lele-ChrLele28 23047078 23049763 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1984 18 544 Inorganic Solute Cotransporters AT2G32830 78.261 0.0 865