Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1982 ATGGAGCAGTTATGTTTCAGCCTTACCTCGGCAACCCTATTCACTTCTTTACTGATTAGGGAGAGAGCAATTGAAAGGATTAATAATGTTATTGGAAAATACAACGATTTGAGGCTCAGAATATTTTCCAAGAACCCTAGTTTATTCCCTGAAGAGGTGTTCAACATTGAGACCTTCAAGTGGTCATTTGGTATTCTTTTCTGTCGCTTGGTTCGATTACCATCAATGGATGATAAGTTTGCGTTGGTTCCCTGGGCAGATATGCTGAACCATAGTTGTGATGTGGAAACCTTTCTGGATTTTGATAAATCATCAAAGGGAGTTGTCTTTACGACAGATCGTCCCTACCGACCAGGTGAGCAGGTGTTTATTTCGTATGGCAAGAAATCTAACGGAGAGCTTTTGCTATCTTATGGATTCGTTCCAAAGGAAGGCACTAATCCTAGTGATTCAGCTGAGTTATTATTGTCACTCATGAAATCTGATAAATGCTACGATGAGAAGTTACAACTCTTGAAGAAAAATGGACTGTCAACATCACAGTGCTTCCCTGTAAAATTTACTGGTTGGCCATTGGAGTTAATGGCATATGCCTATTTAGCTGTGAGCCCTCCAAGCATGAGAGGCAAATTTGAAGAGATGGCTGCCGCAGCATCGAATAAAACAACTGTAAAGAAGGATTTACAATATCCTGAAATAGAAGAGCAAGCATTGCAATTTATAATAGACAGCTGTGAATCCAGCATATCAAAGTACAAAAAAATTTTACAGGAAAGTGGATCACTTGATTTGGACGTGACTTCTCCAAAACAACTCAACCGAAGACTCTTTTTGAAACAGCTAGCTGTGGACTTGTGCAGTAGCGAGCAAAGAGTACTATTTCGCGCTCAATTTATACTCCGGAGCAGACTGAGGAATATGAGGACTGGTGGATTGAGAGCCCTACAAATTTTCGATGGTTCTAGGAATCTTTTCCAATGA 981 0.4016 MEQLCFSLTSATLFTSLLIRERAIERINNVIGKYNDLRLRIFSKNPSLFPEEVFNIETFKWSFGILFCRLVRLPSMDDKFALVPWADMLNHSCDVETFLDFDKSSKGVVFTTDRPYRPGEQVFISYGKKSNGELLLSYGFVPKEGTNPSDSAELLLSLMKSDKCYDEKLQLLKKNGLSTSQCFPVKFTGWPLELMAYAYLAVSPPSMRGKFEEMAAAASNKTTVKKDLQYPEIEEQALQFIIDSCESSISKYKKILQESGSLDLDVTSPKQLNRRLFLKQLAVDLCSSEQRVLFRAQFILRSRLRNMRTGGLRALQIFDGSRNLFQ 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1982 326 Gene3D set domain protein methyltransferase, domain 1 4 141 - -
Lele28g1982 326 Gene3D - 146 309 IPR036464 -
Lele28g1982 326 ProSiteProfiles SET domain profile. 2 127 IPR001214 GO:0005515
Lele28g1982 326 PANTHER UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE 14 262 - -
Lele28g1982 326 SUPERFAMILY RuBisCo LSMT C-terminal, substrate-binding domain 137 310 IPR036464 -
Lele28g1982 326 FunFam Rubisco methyltransferase family protein 146 309 - -
Lele28g1982 326 Pfam SET domain 54 127 IPR001214 GO:0005515
Lele28g1982 326 Pfam Rubisco LSMT substrate-binding 160 293 IPR015353 -
Lele28g1982 326 SUPERFAMILY SET domain 6 144 IPR046341 -
Lele28g1982 326 SMART set_7 9 133 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1982 Lele-ChrLele28 23028444 23032225 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Lele28g1982 Rubis-subs-bind 1.5e-20 No_clan