Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1980 ATGAGCGGGGCTGGGGTTAGGGCTTCGATTACGCCCAATACAAGGAAGATGATCCAGAATATCAAAGAGATTGCAGGTAATCATAGTGAAGAAGAGATTTATGCAATGCTCACGGAATGTTCTATGGATCCCGACGAGACCGCCCAGAAGCTCCTCCTTCAGGACACTTTTCATGAGGTCAAAAGAAAAAAGGACAGGAGAAAGGAGAATCTTAGCAACAGAGAGTCTGGGGAGTCACATTGGAAACCTGGCACCCAAGGTCGGGGGGTTAGGGGTGGGGGTGGTCGAGCTAGTTTTTCATCCCATCATGTGTCGCATGATGCTGTTGGAAGCAAGAATTCTGATAGAGGCAAAGATAATGGAACCAATCAAGTCACTGAGAAAAGTGCACCATTATTGCTAGCTTCTCAAGAGACAAAGAACAAAGAAAGAAGATCCCAAGCTAACTCTGCTTCTGTTATTGTCAATGGTCCTACAATTGCTGCTTCTGGAACTACTAGCAGTGTGAATCCTTCCTCCTCATCTGGTGGAAGTGAAGGAAGAGGTGCATCTTTTGGTGGCAAAAATAGTTTGGGTAGTAATTTACCTTCTGATACTTCAAACAAAGATCAAGTGCTGGCTCCTCCCAATGATTTGCGGTCTTCTGGTGCTGTTGATGCTATTAGACATGAAGTGGGAAACCAACGTCCTCCTGGTGACTTTTATGCTGCTAACTTGGTTGATAACAAGTCAACTGCTGCTTCTGAGACTGTTAGCTCTTCCGTGCAAGGAAAAATTCTTGGCAAATCCCCGGGAGCTACAAAGAATCACCTTTCTGAGTCAGCGCCATCTTCTACGACAGCAACACATGCAAACACTTCAAATAGTCGCCCATCATCTAATTATAGCAATCGCACACAACAATTACTTGGCTCTCAGAAAGCTGGTTCTAATAAAGAGTGGAAACCAAAGCCAACAAATACAATTAATCAGGGTTCTGGACCAGCTGGTTCATCTGAGGTTACCTCCGTCTTGGCTGAGGAAACTGAGAAGTTGCAGTCAGCGCCTTGTGTTCTTGATTCTGAAGAGGCTTCTTCTAAACTGCAAAGGAAGCTGGAGGATTTACGTCTTCCACAACCTCATGTTATACTTCCCAATCATATTGTTGTCCCTGATTCTGAGAAGACAAAATTTAGTTTTGGGAGTTTGGGAATGACTTTTGGAGTTCATACAAGCCATGCCAGCACCCCAGATAGTGACAAGAGTTCTACACCTCTTTCAGAAACATCACAGGCTATTGAAGAAACCACGGATGAGCAGGCCTCAAGTCAAAAAGCTGCCGTTACTGTTGAGGTGGGAGATTATCCTGACCGTCCACAATCACCCACAACTGCACCTGAGAACTTGCCATCTAGTGAGGTGGATGTGTCATCCAGTGCCATTCAAGATTACAATGAATCCAAGCAAGATGCTGCTTTGCCATCTGGAGCACATCAACAGTCAGCAGTGCAAACTTCTCCAAACTACAGTTTTGGTTTTGTGCCTCCGATGTTGGGAACTCAGCTTTCACCATTTGATAATTCTGAGTCTCAAGCACTAGATATTTCCCGGCTTCCAAGCTTTGTCCATCAACCATTTGATCCAACTAGTTACTATGCCCAGTTTTACCGCTCAGGTGCTGATGGTGATGGCCGGCTTTCTCCTTTTCAATCTGCTGGGGTCTCTGCCAAGTATGGTGGCAATGTTACAGTTCTTCCTACACCAAACTCTCAATCTCCACAAGAGGGTGGTGTCCTTTCTACAGCAGGACCAACCCCACTTGTCACTCAAGCTGCTGGACTGATGCAAAGCTCCATAGCAGTGACTCAGCAGCCTGTCACCGTCTTTCGACCACCAAGTGGGGTTCATCTATCCCATTATCCACCAAATTATATTCCTTATGGTCACTATTTCTCCCCATTTTATGTTCCACCTCCGGCAATTCACCAGTTTTTGGGTAATGGTGCATTTCCTCCACAACCTCAGGCTAGCCCTGTCTATCCACCTCCCCCAGCAGCTGCTGCAGCAGGAATGAAATATCCACTTCCTCCATACAAACCTGGAACTAATGCTGCAAACCCAGGTCACATTGTATTGCCAAGTGCCTATGGAGCGTATGGCTCCTCTCCGGTCGGTTATAATCCTAGTTCCACAGCAACTGCAGGAAATTCAAACTCTAATGAAGATCTAGGTCCCTCCCAGTTCAAGGAAAGTAATGTGTACATCAGTGGGCAGCAGAGCGAAGGTTCAGCAGTTTGGGTGGCTGCTCCGGGCAGAGAAATGTCCAGTTTGCCAACTAGCTCATTCTACAGCCTTCCACCCCAAGGTCAGCATGTGACTTTTGCTCCAACGCAGCCTGGCCATGGCACCTTTGCTGGCATCTATCACCCTGCACAAGCTGTAACAGCAGCAACGGTCCATCCACTGCTTCAACAGTCGCAGACAATGGCAGGAGCAGTTGACATGGTGGGACCTGGAGGTAGTGTTTATCAGCAGCCTCAGCATTCACAAATGAATTGGCCGAAAGCTGGAAAATTTGGCAATAATCTTCTGACTGCTTGGGTTGAGGACATGAAAGTGAATTTTGATGATAGCAAGAAAGTTACTTACTCAAGCAAATATTGTTGCTGTGGCTCACAGGATGAATATGGGGCAATAGGAATTAGTTTAGTGTCCAATCAGAGACTTACCGACACTCGGACTGAGATTGGGGTCACAGACAAGGAAGCTGGCAGTGACTCTTAA 2763 0.4636 MSGAGVRASITPNTRKMIQNIKEIAGNHSEEEIYAMLTECSMDPDETAQKLLLQDTFHEVKRKKDRRKENLSNRESGESHWKPGTQGRGVRGGGGRASFSSHHVSHDAVGSKNSDRGKDNGTNQVTEKSAPLLLASQETKNKERRSQANSASVIVNGPTIAASGTTSSVNPSSSSGGSEGRGASFGGKNSLGSNLPSDTSNKDQVLAPPNDLRSSGAVDAIRHEVGNQRPPGDFYAANLVDNKSTAASETVSSSVQGKILGKSPGATKNHLSESAPSSTTATHANTSNSRPSSNYSNRTQQLLGSQKAGSNKEWKPKPTNTINQGSGPAGSSEVTSVLAEETEKLQSAPCVLDSEEASSKLQRKLEDLRLPQPHVILPNHIVVPDSEKTKFSFGSLGMTFGVHTSHASTPDSDKSSTPLSETSQAIEETTDEQASSQKAAVTVEVGDYPDRPQSPTTAPENLPSSEVDVSSSAIQDYNESKQDAALPSGAHQQSAVQTSPNYSFGFVPPMLGTQLSPFDNSESQALDISRLPSFVHQPFDPTSYYAQFYRSGADGDGRLSPFQSAGVSAKYGGNVTVLPTPNSQSPQEGGVLSTAGPTPLVTQAAGLMQSSIAVTQQPVTVFRPPSGVHLSHYPPNYIPYGHYFSPFYVPPPAIHQFLGNGAFPPQPQASPVYPPPPAAAAAGMKYPLPPYKPGTNAANPGHIVLPSAYGAYGSSPVGYNPSSTATAGNSNSNEDLGPSQFKESNVYISGQQSEGSAVWVAAPGREMSSLPTSSFYSLPPQGQHVTFAPTQPGHGTFAGIYHPAQAVTAATVHPLLQQSQTMAGAVDMVGPGGSVYQQPQHSQMNWPKAGKFGNNLLTAWVEDMKVNFDDSKKVTYSSKYCCCGSQDEYGAIGISLVSNQRLTDTRTEIGVTDKEAGSDS 920
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1980 920 PANTHER FLOCCULATION PROTEIN (DUF1296) 1 848 IPR044277 -
Lele28g1980 920 MobiDBLite consensus disorder prediction 146 180 - -
Lele28g1980 920 MobiDBLite consensus disorder prediction 454 472 - -
Lele28g1980 920 MobiDBLite consensus disorder prediction 267 337 - -
Lele28g1980 920 MobiDBLite consensus disorder prediction 404 440 - -
Lele28g1980 920 MobiDBLite consensus disorder prediction 404 472 - -
Lele28g1980 920 SUPERFAMILY UBA-like 10 72 IPR009060 GO:0005515
Lele28g1980 920 MobiDBLite consensus disorder prediction 187 208 - -
Lele28g1980 920 MobiDBLite consensus disorder prediction 115 136 - -
Lele28g1980 920 MobiDBLite consensus disorder prediction 58 76 - -
Lele28g1980 920 Pfam GBF-interacting protein 1 N-terminal 11 69 IPR009719 -
Lele28g1980 920 MobiDBLite consensus disorder prediction 248 337 - -
Lele28g1980 920 MobiDBLite consensus disorder prediction 58 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1980 Lele-ChrLele28 23009462 23021646 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele28g1980 28 23009462 23021646 Lele01g1626 01 11331152 11336365 CCT
Lele28g1980 28 23009462 23021646 Lele02g1985 02 23508916 23513102 CCT
Lele28g1980 28 23009462 23021646 Lele03g1621 03 10593465 10597657 CCT
Lele28g1980 28 23009462 23021646 Lele04g1935 04 23859554 23864022 CCT
Lele25g1934 25 26998386 27006860 Lele28g1980 28 23009462 23021646 hybridization
Lele26g1977 26 23181435 23193874 Lele28g1980 28 23009462 23021646 hybridization