Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1962 ATGGCGACACAAGCTTTGGTATCTTCTTCGTCTCTCACCTCGTCGGTGCAGGCTGTGAGGCAGATTCTGGGAGGGAGATCGACCCAGTATCCAATTGGGTCATCTAGAAAGGCTTCTTTTGTAGTGAAGGCTTCTTCTACACCTCCTGTCAAGCAAGGGGCAGACAGACAATTGTGGTTTGCATCCAAACAGAGTCTTTCCTACTTGGATGGCAGTCTTCCAGGTGACTATGGATTTGACCCACTAGGACTCTCAGACCCAGAGGGACCAGGAGGGTTCATTGAACCCAGATGGCTAGCATATGGTGAAATCATCAACGGACGTTATGCAATGTTGGGTGCAGTAGGAGCCATAGCACCTGAAATCCTTGGCAAGGCTGGTCTAATCCCTCAGGAAACAGCACTTCCATGGTTCAAAACTGGAGTGATCCCACCAGCAGGAACCTACAACTACTGGGCTGACCCATACACTCTCTTTGTCTTTGAAATGGCTCTAATGGGATTTGCAGAGCACAGGAGATTCCAAGATTGGGCCAATCCCGGGTCCATGGGGAAGCAGTACTTCTTGGGCCTAGAGAAGGGCTTGGGAGGGTCTGGCGACCCGGCTTACCCTGGAGGCCCATTGTTTAACCCTCTTGGATTTGGGAAGGACGAGAAGTCAATGAAGGATTTAAAGCTGAAGGAAGTGAAGAATGGGAGGTTGGCTATGTTGGCTATCTTGGGATACTTTGTACAAGGTCTTGTGACTGGTGTTGGACCCTACCAGAACCTTCTGGATCATTTGGCTGATCCTGTGCACAACAATGTCTTGACCAGCCTTAAGTTCCATTGA 831 0.497 MATQALVSSSSLTSSVQAVRQILGGRSTQYPIGSSRKASFVVKASSTPPVKQGADRQLWFASKQSLSYLDGSLPGDYGFDPLGLSDPEGPGGFIEPRWLAYGEIINGRYAMLGAVGAIAPEILGKAGLIPQETALPWFKTGVIPPAGTYNYWADPYTLFVFEMALMGFAEHRRFQDWANPGSMGKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKDLKLKEVKNGRLAMLAILGYFVQGLVTGVGPYQNLLDHLADPVHNNVLTSLKFH 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1962 276 Gene3D Chlorophyll a/b binding protein domain 57 275 - -
Lele28g1962 276 FunFam Chlorophyll a-b binding protein, chloroplastic 57 275 - -
Lele28g1962 276 Pfam Chlorophyll A-B binding protein 67 245 IPR022796 -
Lele28g1962 276 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 8 271 IPR001344 GO:0009765|GO:0016020
Lele28g1962 276 SUPERFAMILY Chlorophyll a-b binding protein 55 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1962 Lele-ChrLele28 22878219 22879656 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1962 1 276 Chloroplast and Mitochondria Gene Families AT1G61520 84.420 1.13e-164 456
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele26g1959 26 23048155 23049590 Lele28g1962 28 22878219 22879656 hybridization