Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1961 ATGGCGGGTAGACGAGAAGTTGGAAATCGAAACTTTAAATGGCGCTGGACCTCATCATCATCACTTGTTTTTTTCTCTATTGTCAAGTCACTAGGTCACTGGTCTTTGCTGGAGATCGTCATCGCTAATCTTTGTCTTCTTTCGATCACTTTCTTCCTTCATAACTGTTGGGACTTAAAGGGTATCGACTATCCTCTATATGTGGGTTGGTATGGGAAAATGTTTCTTGGCCAAGAAATCCCAATCTCTCTCGTTAGAGTGATAGAAGAGAACCTAACGCAGCTGAAGATGCTCAATGCTGTTCTTTTCTCTGCTATTTGCAGTGAGAAATACTATGCCGATGTCCTTGCTTCTGGCGAACTAACAAAACTAGAAGAAGATGGTGCAGTTGGGCTCTATATCATGACCATAGGTGTTTTAGCACCTTATCGCCGCCTTGGTATTGCGCTTGCTGATTGCTGGTACGGTTCTGATATGGTGATTTATGTCAATATTGGGGTGTCATATGCAGGAACAAGGCTGATGAATCATGTTCTTGATTTGTGCTCCAAGGAAAACATGTCTGAGTACTTGCATGTGCGCACAGACAATGAAGATGCCATAAACTTTTATAAGAAATTTGGGTTTGAAACGATGGAAACGATCCCAAACCATCATAGGAACGCCATTGTTATTAGAGATTGCTATGGTCTAACTAAGCGTTTGGCTAGAAGGGAAGGTTGCAAATACTTATAA 735 0.4163 MAGRREVGNRNFKWRWTSSSSLVFFSIVKSLGHWSLLEIVIANLCLLSITFFLHNCWDLKGIDYPLYVGWYGKMFLGQEIPISLVRVIEENLTQLKMLNAVLFSAICSEKYYADVLASGELTKLEEDGAVGLYIMTIGVLAPYRRLGIALADCWYGSDMVIYVNIGVSYAGTRLMNHVLDLCSKENMSEYLHVRTDNEDAINFYKKFGFETMETIPNHHRNAIVIRDCYGLTKRLARREGCKYL 244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1961 244 Gene3D - 78 240 - -
Lele28g1961 244 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 82 236 IPR000182 GO:0016747
Lele28g1961 244 PANTHER N-ALPHA-ACETYLTRANSFERASE 171 235 - -
Lele28g1961 244 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 171 235 IPR016181 -
Lele28g1961 244 Pfam Acetyltransferase (GNAT) family 170 209 IPR000182 GO:0016747
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1961 Lele-ChrLele28 22872941 22876341 Dispersed/Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele28g1961 Acetyltransf_1 7.4e-07 CL0257
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1915 25 26852490 26856784 Lele28g1961 28 22872941 22876341 hybridization
Lele26g1958 26 23044448 23048053 Lele28g1961 28 22872941 22876341 hybridization