Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1960 ATGTTGCCTCGCCAAGAAATCCCAATCTATCTCGTTAGCGTGATAGAAGAGAATCTGACGCAGCTGAGGGAACTCAATAAGGTTCTTTTCTCTCTTCGGTACAGTGAGAATTACTATGTCGATGTCTTTGCTTCTGGCGAACTATCAAAACTAGCTTATCAAGATGATACTTGTGTGGGTGCAATTGCATGCCGGTGTGAGAAGAAGGAAGATGGTGCAGATAGGGTCTATATCATGACTATAGGTGTTCTCCCACCTTATTGCCGCCATGGTATCGGAACAAAGCTAATGAATCATGTTCTTGATTTGTGCTCCAAGGAGAACATATCTGAGGTTTACTTGCATGTGCGCACAGACAATGAAGATGCCATAAATTTTTATAAGAAATTTGGGTTTGAAATGACAGAAACGATCCGAAACTTTTACACATTTGAGCCTGTTAAAAAAGACTGCCACGTTTTCACCAAGCGTTTGGCTGTTGTCACCGAGCAGGAGGAGGTAGCAGACGCGAAGGTTGCAAATGCAGATAAGAAATAA 537 0.4227 MLPRQEIPIYLVSVIEENLTQLRELNKVLFSLRYSENYYVDVFASGELSKLAYQDDTCVGAIACRCEKKEDGADRVYIMTIGVLPPYCRHGIGTKLMNHVLDLCSKENISEVYLHVRTDNEDAINFYKKFGFEMTETIRNFYTFEPVKKDCHVFTKRLAVVTEQEEVADAKVANADKK 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1960 178 FunFam Putative n-alpha-acetyltransferase 50 6 159 - -
Lele28g1960 178 Gene3D - 6 159 - -
Lele28g1960 178 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 9 151 IPR000182 GO:0016747
Lele28g1960 178 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 12 158 IPR016181 -
Lele28g1960 178 Pfam Acetyltransferase (GNAT) family 49 132 IPR000182 GO:0016747
Lele28g1960 178 PANTHER N-ALPHA-ACETYLTRANSFERASE 6 157 - -
Lele28g1960 178 CDD NAT_SF 51 115 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1960 Lele-ChrLele28 22870822 22872516 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lele28g1960 Acetyltransf_1 7.7e-17 CL0257