Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1950 ATGACGAGAAGCTCTAAGACCTTCGTCTTCTTCGTCTTCCTCTTGTTAGTGCTTCCGGCTTTTGTAGTTTCAGAGTGCACATGTGAAGATGAGGAAGAAGATCGTGACAGAGACAAGGCTATGAAGTACAAAATAGGGGCCATAGCTTCTATACTGGTTGCGGGTGCTATCGGAGTTCTGATTCCTGTCATCGGAAAGTTTGTGCCGGCTTTTAGTCCCGACAGAGACATCTTCTTCGTGATCAAGGCCTTCGCCGCCGGAGTTATATTAGCCACCGGATTCATTCACGTCCTTCCTGACGCGTTCGAGAGCTTGACGTCTCCTTGCCTGAGCGATCATCCGTGGGGAGACTTTCCCTTCACTGGTTTTGTTGCGATGTGTGCGGCCATGGGAACGCTAATGGTGGACGCTTTCGCCACTGTGTATTTCAAGAAACGTCATATGAACAATAACGGAGACGAAGAGAAAAACTCAGGACATGAAGGTCATATTCATCTTCACACTCACGCCACACATGGTCATGCTCATGGATCATCGGATTCTGGTTCAACTCAGCTCCTTCGTCACAGAGTCATATCACAGGTGTTGGAGCTGGGGATAATAGTGCACTCAGTGATAATAGGGATATCGTTGGGAGCATCTGAGAGTCCCAAAACTATAAGGCCTCTGGTCGCTGCCTTGACTTTTCACCAGTTTTTTGAAGGCATGGGACTTGGAAGTTGTATCACTCAGGCCAAATTCAAGAACCAAACTATTGCAGTGATGGCATTGTTCTTTGCTCTTACTACTCCGGTGGGAATAGCGATTGGAATAGGAATTACAAATGTGTATGATGAGAATAGCCAGAATGCTTTGATCGTTGAAGGAATATTCAATGCAGCTTCAGCAGGAATCTTGATTTATATGGCACTTGTTGATCTTCTAGCTGCAGATTTTATGACTGAAAGAATGCAAAATAGTACCCGTCTTCAAATTGGAGCAAATATTTCTCTACTTTTAGGATCTGGTTTTATGTCTCTTCTAGCTAAATGGGCTTGA 1038 0.4499 MTRSSKTFVFFVFLLLVLPAFVVSECTCEDEEEDRDRDKAMKYKIGAIASILVAGAIGVLIPVIGKFVPAFSPDRDIFFVIKAFAAGVILATGFIHVLPDAFESLTSPCLSDHPWGDFPFTGFVAMCAAMGTLMVDAFATVYFKKRHMNNNGDEEKNSGHEGHIHLHTHATHGHAHGSSDSGSTQLLRHRVISQVLELGIIVHSVIIGISLGASESPKTIRPLVAALTFHQFFEGMGLGSCITQAKFKNQTIAVMALFFALTTPVGIAIGIGITNVYDENSQNALIVEGIFNAASAGILIYMALVDLLAADFMTERMQNSTRLQIGANISLLLGSGFMSLLAKWA 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1950 345 TIGRFAM zip: ZIP zinc/iron transport family 26 345 IPR004698 GO:0005385|GO:0016020|GO:0071577
Lele28g1950 345 Pfam ZIP Zinc transporter 43 342 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lele28g1950 345 PANTHER ZINC/IRON TRANSPORTER 40 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1950 Lele-ChrLele28 22799539 22801420 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1950 24 345 Inorganic Solute Cotransporters AT3G12750 58.308 2.69e-138 395
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1905 25 26770078 26771752 Lele28g1950 28 22799539 22801420 hybridization
Lele26g1944 26 22974079 22975938 Lele28g1950 28 22799539 22801420 hybridization