Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1944 ATGAAGCTCCATCTTCTGCTTTCCCTTCTCCTCTTTGGCTCCACTTCAATCTTCATCTTCCTCCCACAGATCGCTCTCGCAGCCACACCTAAGCTCAGCATTCATGAAGTGAGGGCATTGAAGGAGATAGGGAAGAAGCTGGGGAAGAAGGAATGGGACTTTGGAGTAGATCCCTGCAGTGGCAAAGGCAAATGGAATGTGTCAGATGAGAGGAAAGGCTTTGCCAACTCTGTCACCTGTGATTGCTCCTTCAATCTCAATTCATCTTGCCATGTTGTAAGCATATTTTTTAAGGCTCAGAATCTTTCCGGCACTCTTCCGCCAGAGTTCTCCAAGCTTCAGCATCTCAAGCAATTGGACCTCAGTCGTAACATCTTCACTGGTTCTATACCTCAGCAATGGGCGACTATGCACTTGGAAGAGCTCTCTCTCATGGGGAACAAGTTGTCAGGTCCTTTTCCTAAAGTTCTTACCAATATCACGACCCTCAGAAACCTGAGTATTGAAGGGAACCTATTTTCAGGCCCCATTCCTCCAGAGATTGGAAACTTGGTCAATTTAGAAAAAATCATTCTGTCATCAAATGGATTCACTGGAGAATTGCCGAAGGGGCTTTCAAAGTTGACCAAGTTGACTGATTTGAGGATTAGTGACAATAATTTCTCTGGGAGGATACCCGATTTCATTAGCAAATTGACATCAATTCAAAAGCTGCACATTGAGGGTTGCTCACTTGAGGGACCCATACCTTCCAGCATTTCTTCCTTGAGAAGATTAAGTGATTTGAGGATAACTGACCTGAAAGGTAGAGGCTCATCTTTCCCATCATTGGGTTATATGAAATCAATGAGGACCCTTATACTGAGGAGATGCTTGATTAAAGGAGATATCCCCTACTATATTGGGAATATGAACAAACTAAAAGTCTTAGACTTGAGTTTCAATGACTTGACTGGAAGGATACCTACCTCTTTTGACCAGCTCGAAAAAGTAGACTTCATGTATCTTACTGGGAACAAGCTAACAGGGACTATACCTAGCTGGGTTCTTGGAAGAAATGGAAACGTTGATATTTCTTACAATAACTTTAGCTGGGAGAGCTCAAGTCCAGTTGAATGTCCAAGAGGGAGTGTAAATTTAGTGGAGAGCTACTCTTCTTCTGTGAATAAACAAAAAAATGTTCACGCGTGCTTGAAAAAGAACTTCCCATGCTCTGATTCAGACAGCCAATACTACTCCTTGCACATTAACTGTGGCGGTAAGGAAGAAAATATCAATGGTACTATTTATGAAGGGGACAGAGAACAAAGAGGTGCTTCAATGTTTTACTATGGCCGGAATTGGGCTCTCAGCAGCACCGGGAACTTCATGGACAATGATATTGACTCTGATCCTTATATTGTGACCAACACTTCCAAACTTGTCAGTGTCTACGCCCCCAGTTCAGAACTATACAAAACAGCTCGTTTGTCTCCCCTTTCTCTCACATACTATGGACTCTGTCTAATGAATGGAAACTACACTGTTAAGCTCCACTTCGCAGAGATTATGTTTATCAATGATAGATCATTTAACAGCCTTGGGAGGCGTGTATTCCACGTCTACATCCAGGGGAAGTTGGTCCTAAAGGACTTCAATATTGAGAAAGAAGCTGGTGGGACTGGAAAGCAGATTGTGAAGACATTTAATGCCACTGTCATACAACATTCTTTGAAGATTCACTTTTACTATGCTGGAAAGGGGACGACTGGCATACCCACAAGAGGAATTTATGGACCTCTGGTATCTGCCATATCAGTATATCCTAATTTTAAACCTCCATCACCAGGGACTAAAAAGAGAACGTTTATTATAAACATAGTTGCTATGGTAGCTGCTCTTGTGCTTCTTGTTCTGATGCTCCTAGGTATCATGAGGTGGAAGGGCTGGTTAGGAGGCCAAGACTCCGTGTATAAAGAGCTTAGAGGAATAGACCTGCAGACAGGATTATTCACATTAAGACAAATCAAAACAGCAACCAAAAACTTTGATGCTACTAACAAAATCGGAGAAGGCGGCTTTGGTTCTGTTTACAAGGGTCTACTATCCGACGGCATTGTAATCGCGGTAAAGCAACTCTCCTCGAAATCTAAGCAGGGAAACCGCGAGTTTGTGAATGAGATAGGAATGATATCTGGACTTCAACATCCCAATCTTGTAAAGCTTTATGGATGTTGTGTGGAAGGGAACCAGTTGATACTGATATATGAGTATATGGAAAATAATTGTCTATCACGCGCACTTTTCGGAAAAGATCCAGCCTGCAAAGCAAAACTAGACTGGACAACCAGGAAGAAAATTTGCCTCGGTATAGCTCGAGCTTTGGCTTATCTGCAGGAAGAGTCCAGAATAAAAATCATACATAGGGATATAAAGACTAGTAATGTGTTGCTAGATAAAAATTTTAATGCTAAGGTTTCAGATTTTGGTTTGGCAAAACTTATCGAAGATGATAATACCCATATCAGCACTCGAGTTGCTGGAACCATCGGTTATATGGCTCCGGAATATGCAATGCGTGGCTATTTGACTGACAAAGCAGATATTTATAGCTTTGGGGTGGTTCTATTGGAAACTATAAGTGGAAAGAGCAATACAAATTACAGACCCAATGAAGAATTTGTTTATCTTCTTGATTGGGCCAATGTTCTGCAAGAGAGAGGAAATCTACTGGAGCTGGTTGATCCAGACTTAGGATCAGACTATTCAACTGAGGAGGCCATAGTTATGCTAAATGTGGCTCTTTTATGTACCAATGCATCTCCCACGCTTAGGCCAAAAATGTCCCAAGTTGTTAGCATGCTAGAAGGCCAAACAGATATTCAAGATTTGCTTTCTGACCCAGGATACTCTGCAAGTAGTTCCAAACACAGGTCCATAAGGAATCACTTCTGGCAGAACCCAGATACTGATTCCTCCAGTTCATACCTTGGGACAGAAGAAAGCTTCCGTCTTATACAAGTTAACCCAGATAGATCAGATAAGTAA 3027 0.4189 MKLHLLLSLLLFGSTSIFIFLPQIALAATPKLSIHEVRALKEIGKKLGKKEWDFGVDPCSGKGKWNVSDERKGFANSVTCDCSFNLNSSCHVVSIFFKAQNLSGTLPPEFSKLQHLKQLDLSRNIFTGSIPQQWATMHLEELSLMGNKLSGPFPKVLTNITTLRNLSIEGNLFSGPIPPEIGNLVNLEKIILSSNGFTGELPKGLSKLTKLTDLRISDNNFSGRIPDFISKLTSIQKLHIEGCSLEGPIPSSISSLRRLSDLRITDLKGRGSSFPSLGYMKSMRTLILRRCLIKGDIPYYIGNMNKLKVLDLSFNDLTGRIPTSFDQLEKVDFMYLTGNKLTGTIPSWVLGRNGNVDISYNNFSWESSSPVECPRGSVNLVESYSSSVNKQKNVHACLKKNFPCSDSDSQYYSLHINCGGKEENINGTIYEGDREQRGASMFYYGRNWALSSTGNFMDNDIDSDPYIVTNTSKLVSVYAPSSELYKTARLSPLSLTYYGLCLMNGNYTVKLHFAEIMFINDRSFNSLGRRVFHVYIQGKLVLKDFNIEKEAGGTGKQIVKTFNATVIQHSLKIHFYYAGKGTTGIPTRGIYGPLVSAISVYPNFKPPSPGTKKRTFIINIVAMVAALVLLVLMLLGIMRWKGWLGGQDSVYKELRGIDLQTGLFTLRQIKTATKNFDATNKIGEGGFGSVYKGLLSDGIVIAVKQLSSKSKQGNREFVNEIGMISGLQHPNLVKLYGCCVEGNQLILIYEYMENNCLSRALFGKDPACKAKLDWTTRKKICLGIARALAYLQEESRIKIIHRDIKTSNVLLDKNFNAKVSDFGLAKLIEDDNTHISTRVAGTIGYMAPEYAMRGYLTDKADIYSFGVVLLETISGKSNTNYRPNEEFVYLLDWANVLQERGNLLELVDPDLGSDYSTEEAIVMLNVALLCTNASPTLRPKMSQVVSMLEGQTDIQDLLSDPGYSASSSKHRSIRNHFWQNPDTDSSSSYLGTEESFRLIQVNPDRSDK 1008
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1944 1008 Gene3D Ribonuclease Inhibitor 38 203 IPR032675 -
Lele28g1944 1008 ProSitePatterns Protein kinases ATP-binding region signature. 682 704 IPR017441 GO:0005524
Lele28g1944 1008 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 646 751 - -
Lele28g1944 1008 CDD STKc_IRAK 682 950 - -
Lele28g1944 1008 Pfam Protein tyrosine and serine/threonine kinase 679 947 IPR001245 GO:0004672|GO:0006468
Lele28g1944 1008 Gene3D Ribonuclease Inhibitor 206 413 IPR032675 -
Lele28g1944 1008 SUPERFAMILY Protein kinase-like (PK-like) 661 950 IPR011009 -
Lele28g1944 1008 FunFam Putative LRR receptor-like serine/threonine-protein kinase 752 960 - -
Lele28g1944 1008 Pfam Leucine rich repeat 282 341 IPR001611 GO:0005515
Lele28g1944 1008 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 411 603 - -
Lele28g1944 1008 ProSitePatterns Serine/Threonine protein kinases active-site signature. 799 811 IPR008271 GO:0004672|GO:0006468
Lele28g1944 1008 SUPERFAMILY L domain-like 76 347 - -
Lele28g1944 1008 ProSiteProfiles Protein kinase domain profile. 676 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1944 1008 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 232 379 - -
Lele28g1944 1008 Pfam Malectin domain 413 598 IPR021720 -
Lele28g1944 1008 Gene3D Phosphorylase Kinase; domain 1 647 751 - -
Lele28g1944 1008 FunFam Probable LRR receptor-like serine/threonine-protein kinase RFK1 38 201 - -
Lele28g1944 1008 Gene3D - 414 603 - -
Lele28g1944 1008 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 19 984 - -
Lele28g1944 1008 Gene3D Transferase(Phosphotransferase) domain 1 752 960 - -
Lele28g1944 1008 SMART serkin_6 676 948 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1944 Lele-ChrLele28 22727420 22738821 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1944 36 991 Receptor kinase-like Gene Family AT1G53440 53.231 0.0 998
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele28g1944 PK_Tyr_Ser-Thr 4.3e-48 CL0016