Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1929 ATGGAAGAAGCACAGAATTCAGAACAAACCCACATTCCCATACCCGCATTCCCCTCCAAACCCGACAATGCCTCTGACCCCGACATCGCCACCGGAGTTCATGACTCTCTCCGGCGCCGCCGCCGCAGCAGAGACCGACCCATCACCACCAGCAGCAGGAAGAAGACAAAGACGACGAAGATGAGCTCTGATGAACAGAACACAGAGAAAGAAGAAGATCAAGAAGAAGAAGAAGATAGGGAAGAGATAGAGAAGAAGATAGAGGCATTACAGAGGATAGTTCCAGGTGGTGAATCCTTAGGAATGGACAAGCTGTTCGACGAAACTGCAGGTTATATAATCGCATTACAGTACCAAATCAAAGGTTTGAGAGCTCTCACTAGCTTATTCGAGAGGTTAGAGAGAGACAAGTCAAAACTTGGAGGTTGA 429 0.4802 MEEAQNSEQTHIPIPAFPSKPDNASDPDIATGVHDSLRRRRRSRDRPITTSSRKKTKTTKMSSDEQNTEKEEDQEEEEDREEIEKKIEALQRIVPGGESLGMDKLFDETAGYIIALQYQIKGLRALTSLFERLERDKSKLGG 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1929 142 MobiDBLite consensus disorder prediction 49 67 - -
Lele28g1929 142 MobiDBLite consensus disorder prediction 1 83 - -
Lele28g1929 142 CDD bHLH_AtIBH1_like 87 127 IPR044549 GO:0006355
Lele28g1929 142 MobiDBLite consensus disorder prediction 68 82 - -
Lele28g1929 142 Coils Coil 66 93 - -
Lele28g1929 142 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 40 130 IPR044660 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1929 Lele-ChrLele28 22589311 22589739 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1929 53 126 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G21330 35.135 4.25e-07 46.2