Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1898 ATGGTGGGTATTGAAGCTGACGAAGCCGGAGAAAACAACTTTACAGTGACGGTGAGGAAGGAGGAGGTGGTGGCCGCGGTGTTGCCATTGCAAGAGAATCGGCTTCCGCTCTCCAACCTCGACCTCCTTCTGCCGCCGTTAGATGTCGGAGTTTTCTTTTGCTACGACAAGCCAGTCGCCACCGGGAATGCTGTGGTCGGGGCTCTGAAGAATGGCTTGGCTGAGGCTTTGGTTTCCTTCTATGCCTTAGCGGGTGAGGTGGTGACCAACTCCGCCGGCGAGCCGGAGCTCCTCTGCAACAATCGTGGGGTTGATTTCGTGGAGGCTGAGGCTGACGTGGAGCTAAGAAGCCTCAACCTGTACAACCCTGATGATTCCATTGAAGGCAAGCTTGTTCCTACAAAGAAACACGGCGTGCTTTCTATTCAGGCTACGTTTCTCGAGTGTGGTGGGTTAGTAGTGGCATGCTCTTTCGATCACCGTATTGCCGATGCATACTCCGCCAACATGTTCCTCGAATCTTGGGCCCACCTGGCCAAGTCGGACAAGCCCTCGATCTCATCTCTCCCCTCGCGACCGTGTTTCCGCCGGTCTCTCCTATGTCCCCGACGGCCCGGTCCCATCGATCCTTCCATCGACCGCATGTTTGTCCCAGTCTCCGACCTGCCTCCTCCGAAGCAACCCACTGCCGAATCCGACCCCGTCGTCAGTCGGATCTACTACATCGCGGCTGATGAACTTAGCCGCATTCAGTCACTGGCGAACTCAGCTGGGTCAAACGTCGGCGGCGGCAGCATGAAGCGGACCAAACTTGAGTCTTTCTGCGCCTTCTTGTGGAGGATGGTTGCGGCGAGTGCCAAGGGCAAAAGGAAATCAACAAGGGAGCTGATGGAGAATTCGTTGAGTTGGGTGGCCGACGAAGTTCATGAGTTCTTGGAAGACGTAGTGACGGAGGAGCATTTCCTAGGCCTCATAGACTGGGTGGAGGCTCACCGCCCAGGTGGTGCGGTGGCCAGGATATATTGCGGTGGCGAAGAGGAGGGAGAAGAAGGAGTAGCTTTTGTAGTTTCGTCGGGGCAAAGATTCCCAGAAGAAAAGGTGGATTTCGGGTGGGGGAGGCCGGTTTTGGGGTCCTACCACTTCCCGTGGGGCGGAGACGCTGGCTATGTGATGCCGATGCCGAGTCCGGTAGGGAATGGTGATTGGGTGGTTTACATGCACCTTCGAAAAGGACAACTGGAGACGATAGAGTTGGAAGCCGGTCATGTGTTTAGGCCCTTGACTTGGGATTACCTTATTCATTGA 1305 0.5571 MVGIEADEAGENNFTVTVRKEEVVAAVLPLQENRLPLSNLDLLLPPLDVGVFFCYDKPVATGNAVVGALKNGLAEALVSFYALAGEVVTNSAGEPELLCNNRGVDFVEAEADVELRSLNLYNPDDSIEGKLVPTKKHGVLSIQATFLECGGLVVACSFDHRIADAYSANMFLESWAHLAKSDKPSISSLPSRPCFRRSLLCPRRPGPIDPSIDRMFVPVSDLPPPKQPTAESDPVVSRIYYIAADELSRIQSLANSAGSNVGGGSMKRTKLESFCAFLWRMVAASAKGKRKSTRELMENSLSWVADEVHEFLEDVVTEEHFLGLIDWVEAHRPGGAVARIYCGGEEEGEEGVAFVVSSGQRFPEEKVDFGWGRPVLGSYHFPWGGDAGYVMPMPSPVGNGDWVVYMHLRKGQLETIELEAGHVFRPLTWDYLIH 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1898 434 Gene3D - 292 418 IPR023213 -
Lele28g1898 434 Pfam Transferase family 15 291 - -
Lele28g1898 434 Pfam Transferase family 292 420 - -
Lele28g1898 434 Gene3D - 217 291 IPR023213 -
Lele28g1898 434 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 27 395 - -
Lele28g1898 434 Gene3D - 10 213 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1898 Lele-ChrLele28 22338154 22339875 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1898 16 417 Monolignol Biosynthesis Gene Families AT5G48930 23.490 2.78e-24 102