Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1881 ATGAGGCTTTCTTCTTCAGAAGTTGGTCAACCGGCTCAAGAAGGGGAGACAAAATGTTTAAATTCTGAACTATGGCATGCGTGTGCTGGTCCTTTGGTGTCTCTACCACCTGTTGGAAGTCGTGTGGTCTACTTTCCCCAAGGTCACAGTGAGCAGGTTGCTGCTTCAACAAACAAGGAAGTAGATGCACATATTCCCAATTACCCTAACTTGCCACCACAGCTTATCTGTCAGCTTCACAATGTGACAATGCATGCAGATGTGGAAACAGATGAAGTATATGCTCAAATGACTCTTCAACCTTTAAGTCCGCAAGAGCAAAAGGATATATATCTACTGCCTGCAGAATTTGGTACTGCCGGCAAACAACCAAGCAACTACTTTTGCAAAACATTAACAGCAAGTGATACCAGCACTCATGGAGGATTCTCTGTTCCTCGAAGAGCTGCTGAAAAAGTCTTCCCTCCTCTTGATTACTCGCAGCAGCCTCCTGCACAGGAACTAATTGCAAGGGATCTTCATGATAATGAATGGAAATTCAGACACATTTTTCGAGGTCAACCGAAGAGGCATCTTCTAACTACAGGGTGGAGTGTTTTTGTTAGCGCCAAGAGGCTTGTTGCTGGCGATTCAGTACTTTTTATCTGGAATGACAAAAATCAATTGCTCTTGGGAATCCGGCGAGCAAATCGTCCACAGACTGTCATGCCGTCTTCAGTCCTGTCAAGTGACAGCATGCATATAGGTCTTCTTGCTGCTGCAGCTCATGCAGCCGCAACAAATAGCCGCTTTACTATATTCTATAACCCAAGGGCAAGCCCATCAGAATTTGTCATTCCCTTAGCTAAGTATGTCAAAGCTGTATATCATACCCGAGTTTCTGTTGGCATGCGATTTAGGATGTTATTCGAGACAGAAGAATCAAGTGTCCGTAGGTACATGGGTACTATAACTGGCATTAGTGATTTAGATCCTGTTCACTGGCCAAAGTCACACTGGCGTTCAGTGAAGGTTGGTTGGGATGAGTCCACTGCAGGGGACAGGCAGCCTAGAGTTTCCTTGTGGGAGATTGAACCGTTGACAACATTCCCTATGTATCCATCCCCATTCCCTTTGAGGCTGAAACGCCCCTGGCCATTAGGACTACCTTCTTTTGGTCTGAAGGATGGTGACATGACCATTGGTTCGCCATTCCCGTGGCTCCAAGGTGGGCTTGGGGATCAAGGAATGCAATCTCTGAACTTTCATGGACTTGGGGTTGCACCATGGATGCAGCCAAGACTTGATGCTTCTATGTCAGGACTTCAGCCAGAAATATACCAAGCAATGGCTGCTGCTGCACTTCAGGAAATGAGGGCAATGGGTCCATCTAAACCTTCTTCTGAATCTCTGCTGCAGTGTCAGCAGTCTTCAAATGTACCTGGCGCTCCTTCTTCTGGCATCCATAGGGAAGTATTGCAGCAGTCTCAGTCCCAAAATGTCCTACACAACTTTCAAGAAAATCAGTTTCCTTCTCATTCTTCGCCTCTGCAACGACAGTTGCAACGTTACCATCCTTATAATGACCAGAGGCAGCAACAACATAACAGTTTACCTGTTCAGCAGCAGATGTCAAATGTTGTCTCTCCTTTGTCTAATTTGGCATTACCTACCCAGTTTCTCTCTCCATCCATGCCAGCCATTGATTCAAATTGCCAGCAGCAGAGTTTTCCCAAACCTTCCGGGAACCAAATTCCCAGCTCTGATGTTTCTGCTATCCACAGTCTACTAGGATCGTTTCCCCAGGATGGAGTATCCCAATTGCTTAACATGAATGGATCCAACTCTCTGGTTTCTCCTTCTTCCTTACTACCCAGGCAGATAACTGTTGAACCTCAGCTTCAAACTGCTGCTGCTCAGTGTGTATTACCCCAGGTGGAAAACTTGGGGACATCACACTCAGATGTATCTGAACTTCCTATTTTGCCTCCATTTCCCGGAAGAGAATATTCTGCATACCAAGCTTCCAACTTTGCTGGTGCTACAGGGACTGATTATCCTCCCAGTTCAGACATGACAACATCAAGTTGTGTAGATGAATCTGGTTTTTTGCAGTCTTCTGAAAATGTGGAGCAAGCAAATACATCAACTGGAACTTTTGTCAAGGTTCACAAGTCAGGGTGCTTTGGGAGGTCACTGGACATCTCTAAATTTAGCAGCTACGATGAACTACGTACTGAGCTTGCCCGCATGTTTGGGCTTGAAGGGCAACTAGAGAACCCTCAGAGATCAGGCTGGCAGCTTGTATTTGTTGACCGGGAGCATGATGTTCTTCTCCTTGGTGATGACCCTTGGCAGGAGTTTGTGAACAATGTGTGGTACATCAAGATTCTGTCTCCACTTGAAGTACAACAAATGGGCAGAGAAAGTCTTGGTCCCACAGCTTCTTCATTGAGCCACAAGCTTTCTACCACTAGCAATGCTTGCGACAACAACTACGCGAGTCGACACGAGTTGAGAAATCCTAGCAATGGCATTGCGTCGATGGGGCCTTTAGACTACTAG 2544 0.4603 MRLSSSEVGQPAQEGETKCLNSELWHACAGPLVSLPPVGSRVVYFPQGHSEQVAASTNKEVDAHIPNYPNLPPQLICQLHNVTMHADVETDEVYAQMTLQPLSPQEQKDIYLLPAEFGTAGKQPSNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDYSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVLFIWNDKNQLLLGIRRANRPQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITGISDLDPVHWPKSHWRSVKVGWDESTAGDRQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPLGLPSFGLKDGDMTIGSPFPWLQGGLGDQGMQSLNFHGLGVAPWMQPRLDASMSGLQPEIYQAMAAAALQEMRAMGPSKPSSESLLQCQQSSNVPGAPSSGIHREVLQQSQSQNVLHNFQENQFPSHSSPLQRQLQRYHPYNDQRQQQHNSLPVQQQMSNVVSPLSNLALPTQFLSPSMPAIDSNCQQQSFPKPSGNQIPSSDVSAIHSLLGSFPQDGVSQLLNMNGSNSLVSPSSLLPRQITVEPQLQTAAAQCVLPQVENLGTSHSDVSELPILPPFPGREYSAYQASNFAGATGTDYPPSSDMTTSSCVDESGFLQSSENVEQANTSTGTFVKVHKSGCFGRSLDISKFSSYDELRTELARMFGLEGQLENPQRSGWQLVFVDREHDVLLLGDDPWQEFVNNVWYIKILSPLEVQQMGRESLGPTASSLSHKLSTTSNACDNNYASRHELRNPSNGIASMGPLDY 847
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1881 847 SUPERFAMILY CAD & PB1 domains 702 785 - -
Lele28g1881 847 Gene3D - 707 800 - -
Lele28g1881 847 Gene3D - 292 364 - -
Lele28g1881 847 FunFam Auxin response factor 126 230 - -
Lele28g1881 847 ProSiteProfiles B3 DNA-binding domain profile. 128 230 IPR003340 GO:0003677
Lele28g1881 847 Gene3D - 126 229 IPR015300 -
Lele28g1881 847 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 800 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele28g1881 847 MobiDBLite consensus disorder prediction 459 480 - -
Lele28g1881 847 SUPERFAMILY DNA-binding pseudobarrel domain 115 257 IPR015300 -
Lele28g1881 847 SMART B3_2 128 230 IPR003340 GO:0003677
Lele28g1881 847 FunFam Auxin response factor 292 364 - -
Lele28g1881 847 Pfam AUX/IAA family 700 793 IPR033389 -
Lele28g1881 847 FunFam Auxin response factor 706 800 - -
Lele28g1881 847 ProSiteProfiles PB1 domain profile. 711 795 IPR000270 GO:0005515
Lele28g1881 847 CDD B3_DNA 127 228 IPR003340 GO:0003677
Lele28g1881 847 MobiDBLite consensus disorder prediction 452 480 - -
Lele28g1881 847 Pfam Auxin response factor 254 337 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele28g1881 847 MobiDBLite consensus disorder prediction 826 847 - -
Lele28g1881 847 Pfam B3 DNA binding domain 128 229 IPR003340 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1881 Lele-ChrLele28 22210800 22224702 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1881 551 843 B3 DNA Binding Superfamily AT1G30330 46.089 7.86e-67 238
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3-ARF Lele28g1881 AUX_IAA 6.2e-08 CL0072