Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1858 ATGGCAGCTTCATGCTTGAACCCACCCAGGTTATCAAGCACTGAAGATGACACTGTGATACTCTTTTCAACCTCTAATTCTCCACAGGATTCCATCTCCATCAGCGCTTCTTCTTCATCTTCTTCATATTCTTCTTCTTCTTCTTCTGGTAATCATAAACTTTCTATTACAAAACTCTCTTACACTCTTCACCCACAAAAATCCATAACCTTTTCATTCTTTCATGTTCCTCAAAGTCCCAGCAGGCCACTCCATATACTCAAATCAGTCTCTTTTTCTGCAAAAAGTTCTGAGGTTGTTGCTGTTGTTGGTCCTAGTGGCACCGGGAAATCCACGCTTCTTCGTGTCATCGCGGGGCGAGTTAAAGACGAAAACTTTGATCCCAGAAGCATATCAATCAATGATCACCCAATGACTAGTCCGTCTCAGTTGAGGAAGATCTGTGGGTTTGTGGCACAAGAGGATAATTTGCTTCCTCTTTTGACTGTGAAAGAAACCTTAATGTTCAGTGCCAAGTTTAGGCTAAAAGAAATGTCATCAAAGGATAGAGAAGTTAGGGTAGAGAGCTTGTTGCAAGAACTAGGGCTGCTTCATGTTGCAGATAGCTATGTTGGAGATGAAGAAAATAGAGGGATTTCTGGAGGAGAGAGAAAAAGGGTTTCTATAGGTTCTGATATGATTCATAATCCTCCAATTTTGGTCCTTGATGAACCAACTTCAGGCCTAGATAGTTCTTCAGCTCTCCAAGTGATAGAACTTCTTTCATTGATGGTTAAGTCAAAGAAAAGGATAGTGATTCTTTCAATTCACCAACCCAGTTACAGAATATTGCAGTATATTTCTAGGTTCTTGATTCTGTCTCATGGCTCAGTTGTGCATAATGGTAGCTTGAGATCACTTGAGAAAACCATTACCAAGTTGGGATTTCAGATTCCAATACAACTCAATGCTCTAGAGTTTTCCATGGAAATTATAAACACATTGGAAGATTATTCAAAGAATTCCACATATGATGATAGTGACACTTGTCCCATGCAAGACAAGGAGGAAGAAGAAACTGGTGACATTATTAAGAATTATACGACTGACGATAATAACAGCAAAAGGATTTGCAGTGCCTGGTATTTGACCTTCGTTGAGATCTTTTTTCTTTGCTCAAGATTTTGGAAGGTCATTTACAGAACAAAGCAGCTTTTCTTGGCCAGAACAATGCAGGCTTTAGTTGGTGGGTTTGGGCTTGGAAGTGTTTACATAAAGGTAAGGAAGGATGAAGGAGGAGTTGCAGAAAGATTAGGTCTTTTTGCATTTAGCCTGAGCTTTCTTCTATCTTCCACAGTTGAGGCACTTCCAATATACCTTCAAGAGAGATGTGTTCTAATGAAAGAAGCCTCAAGAGGAGCCTACAAAATTTCCTCTTACATGGTGGCAAACACATTCGTCTTCCTTCCTTTCTTGTTCGTAGTATCCATACTTTTCTCGGTGCCTGTGTACTGGATCGTAGGTCTCAACCCGTCCCTCTCGGCTTTCGCCTTCTTCATCTTCATCGTCTGGTTCATAGTGCTCATGGCAAGCTCTCTGGTTCTCTTCTTAAGTGCAGTGTCTCCTGATTTCATTTCTGGGAACTCCATGATCTGCACTGTTTTGGGAGCATTCTTCTTGTTCTCTGGATACTTCATTCCAAAAGAGAGCATCCCCAAGTACTGGATTTTCTTGTACTATGTGTCACTATATAGGTACCCTCTTGATGCATTGCTCACAAATGAGTATTGGAATGTTAGAACTGAGTGTTTCTCATCAGAAGAAGCAGAATCTGCTAATTGCTTGCTTACTGGTTTTGATGTTCTTAAGAGTAGAGGACTTGAAAAAGATACAAGATGGATGAATGTGAGCATCATGCTTGGCTTCTTTCTGCTATATCGCGTGCTTTGTTGGGTTGTTCTTGCTAGAAAGGCTTCCAAGGCAACCATATAG 1971 0.4069 MAASCLNPPRLSSTEDDTVILFSTSNSPQDSISISASSSSSSYSSSSSSGNHKLSITKLSYTLHPQKSITFSFFHVPQSPSRPLHILKSVSFSAKSSEVVAVVGPSGTGKSTLLRVIAGRVKDENFDPRSISINDHPMTSPSQLRKICGFVAQEDNLLPLLTVKETLMFSAKFRLKEMSSKDREVRVESLLQELGLLHVADSYVGDEENRGISGGERKRVSIGSDMIHNPPILVLDEPTSGLDSSSALQVIELLSLMVKSKKRIVILSIHQPSYRILQYISRFLILSHGSVVHNGSLRSLEKTITKLGFQIPIQLNALEFSMEIINTLEDYSKNSTYDDSDTCPMQDKEEEETGDIIKNYTTDDNNSKRICSAWYLTFVEIFFLCSRFWKVIYRTKQLFLARTMQALVGGFGLGSVYIKVRKDEGGVAERLGLFAFSLSFLLSSTVEALPIYLQERCVLMKEASRGAYKISSYMVANTFVFLPFLFVVSILFSVPVYWIVGLNPSLSAFAFFIFIVWFIVLMASSLVLFLSAVSPDFISGNSMICTVLGAFFLFSGYFIPKESIPKYWIFLYYVSLYRYPLDALLTNEYWNVRTECFSSEEAESANCLLTGFDVLKSRGLEKDTRWMNVSIMLGFFLLYRVLCWVVLARKASKATI 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1858 656 MobiDBLite consensus disorder prediction 27 50 - -
Lele28g1858 656 SMART AAA_5 96 298 IPR003593 -
Lele28g1858 656 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 83 303 IPR027417 -
Lele28g1858 656 Pfam ABC transporter 87 240 IPR003439 GO:0005524
Lele28g1858 656 Pfam ABC-2 type transporter 381 589 IPR013525 GO:0016020|GO:0140359
Lele28g1858 656 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 71 313 IPR003439 GO:0005524
Lele28g1858 656 Gene3D - 71 323 IPR027417 -
Lele28g1858 656 FunFam ABC transporter G family member 23 78 311 - -
Lele28g1858 656 Pfam ABC-2 type transporter 270 338 IPR043926 GO:0140359
Lele28g1858 656 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 37 641 - -
Lele28g1858 656 ProSitePatterns ABC transporters family signature. 212 226 IPR017871 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1858 Lele-ChrLele28 21995070 21997944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1858 67 340 Calmodulin-binding Proteins AT2G36910 26.042 1.74e-13 72.4