Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1852 ATGGCTTCACTAAGCCTCTTTCTCCTTCAAGACCTCGCAGTCGCCGTTATCATCTTCTTCACCACTCGTTTCTTCTTCCGCTCCGTCTTCAAAGGCCATCACCGGAAGCTCCCTCCCGGCCCCACTGGATGGCCACTCCTCGGAGCCCTCCCAATTCTCGGCTCCATGCCTCACGTCACGCTCTTCAACCTCGCCAGAAAATACGGCCCCGTCATGTACCTCAAGATGGGCACCAACGGCATGGTCGTCGCCTCCACGCCGGACGCCGCTCGAGCATTCCTCAAAAACCTCGACGTGAACTTCTCGAACCGGCCGCCGAACGCAGGCTCCATCATCCTAGGTTACAACGCGGACATGGTGTTCGCCGACTACGGCTCACGGTGGAAGCTGGAGAGGAAGATAAGCAACCTGCACATGCTCGGCGGGAAGGCTCTGGACGACTGGGCTCATTTCCGAGTGATCGAGCTCGGGCACATGCTCCGGGCGATGTACGACGCGAGCAAGCAAGGACAAGCTGTTGTTATCCCTGAGATGTTGACCTACGCCATGGCGAACATGGTAGGGCAAGTGATTCTGGGGAAGAGAGTGTTCCAGACGAAGGGATCGGAGAGTAATGAGTTCAAGGACATGGTGGTGGAACTGATGACGAGTGCGGGATTATTCAACATCGGCGATTTCATTCCGTTCTTGAGGTCGCTGGATTTGCAGGGAATAGAACGTGGGATGAAGAATCTGCATCAGAAGTTCGATGAATTGTTGACGAAGATGATTGAAGAACACCAAGCTACGGCTCATAAACGAAAGGGCAAGGCTGATTTCTTAGATGTTGTTACCAAATACAGCAAGGAGAACCCTGAAGCTGAGCCTCTTACGTTGACCAACATTAAGGCACTTCTTCTGAACCTCTTCACAGCTGGAACTGACACGTCATCAAGCGTCATAGAGTGGGCCCTAGCAGAAATGTTGCAGAACCCCTCAATCATGAAGCGAGCTCACGACGAGATGGACCGAGTCCTCGGCCGTCAACGTCGTCTCCAAGAATCCGACATAGCCAACCTCCCTTACTTCCAGGCAATCTGCAAGGAGACATACCGGAAACATCCATCAACGCCGCTGAACCTGCCGAGAGTTTCGACGGAAGCATGCGAGGTGAACGGTTACTACATACCGAAGGGAACAAGACTGAGTGTGAACATCTGGGGGATCGGAAGGGATCCAACTGTGTGGGAGAAGCCATTGGAGTTCAACCCAGACAGGTTCATGAGTGGCCGGAACGCCAATATTGATCCACGTGGCAACGACTTCGAGCTCATCCCTTTCGGAGCCGGGCGGAGGATCTGCGCCGGAACCAGAATGGGGATCGTTCTTGTGCACTACATTCTCGGAACTTTGATTCATTCATTTGACTGGAAGCTTCCACATGGAGTTTCAGAGTTGAACATGGAGGAGAGTTTTGGACTTGCGTTGCAGAAGAAAGTTCCTCTCTCTGCTTTGGTTTCTCCTAGGTTGTCTCCTGATGCTTACATTCCATAG 1533 0.529 MASLSLFLLQDLAVAVIIFFTTRFFFRSVFKGHHRKLPPGPTGWPLLGALPILGSMPHVTLFNLARKYGPVMYLKMGTNGMVVASTPDAARAFLKNLDVNFSNRPPNAGSIILGYNADMVFADYGSRWKLERKISNLHMLGGKALDDWAHFRVIELGHMLRAMYDASKQGQAVVIPEMLTYAMANMVGQVILGKRVFQTKGSESNEFKDMVVELMTSAGLFNIGDFIPFLRSLDLQGIERGMKNLHQKFDELLTKMIEEHQATAHKRKGKADFLDVVTKYSKENPEAEPLTLTNIKALLLNLFTAGTDTSSSVIEWALAEMLQNPSIMKRAHDEMDRVLGRQRRLQESDIANLPYFQAICKETYRKHPSTPLNLPRVSTEACEVNGYYIPKGTRLSVNIWGIGRDPTVWEKPLEFNPDRFMSGRNANIDPRGNDFELIPFGAGRRICAGTRMGIVLVHYILGTLIHSFDWKLPHGVSELNMEESFGLALQKKVPLSALVSPRLSPDAYIP 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1852 510 Pfam Cytochrome P450 38 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g1852 510 PANTHER CYTOCHROME P450 98A9 14 507 - -
Lele28g1852 510 SUPERFAMILY Cytochrome P450 38 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g1852 510 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 440 449 IPR017972 GO:0005506|GO:0016705
Lele28g1852 510 PRINTS E-class P450 group I signature 182 200 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g1852 510 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g1852 510 PRINTS E-class P450 group I signature 437 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g1852 510 PRINTS E-class P450 group I signature 447 470 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g1852 510 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g1852 510 PRINTS E-class P450 group I signature 65 84 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g1852 510 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g1852 510 PRINTS E-class P450 group I signature 89 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g1852 510 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g1852 510 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g1852 510 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g1852 510 PRINTS P450 superfamily signature 438 447 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lele28g1852 510 FunFam Flavonoid 3',5'-hydroxylase 2 29 499 - -
Lele28g1852 510 Gene3D Cytochrome P450 29 497 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1852 Lele-ChrLele28 21939047 21941399 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1852 1 508 Cytochrome P450 AT5G07990 45.437 1.10e-167 482