LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele28g1845	ATGGAACCCAGAAGAAGAAGATCGTCCTCTGGAATTCTATTAACGAATCTCTGTTCTCTTCTTCTTGTTGTGCTCTGTTTCTCAGGATCTGCCAGAGCTTACAAGAACTACACGGTGGGAGATTCTCTGGGTTGGTTTGACAATCTGGAGAAACCTGGTGTTGATTACCAGAAATGGGCTTCTGACAAGAAGTTCTCCCTCGGAGATTTCCTCATTTTCAACACAGACACCAATCACTCAGTTATACAAACATATAACCACACTACATATACGCAATGTGACTACGATGATGCACAAGACAAAGACACAACCCAGTGGTCATCTTCGAATCCGTCCAACACTGAGATCCGGCCGGTGACCGTGGCGGTGCCGCTGGTGAAGGAAGGGACTACTTACTTCTTCTCAAGTGATGATGATGGTGAACAATGTGAGAACGGGCAACGTTTTCAAATAAATGTAACATATGGAAAAGGGTTACCAAAAAGCTTGAGAAATGACCCTAATTATGTTGACCCTTCTTCCTCTCCTTCTCCTGCATCAAGCCCAATCTCTGGATCTGATGATGTTGTACCAGACACAATCATTAATACTAATTTCACAAACCCTAAGGGATCAACAAGTGATAAGGATGATGAAGATGATGATGATGACAACGTGAAGTCAACTTCTGGTTCTGTTTCAGCGTTGATTCTGCAAAATTTCATAACAAGTTTTGTGGGATTTTTGTTTTGTTTGGGACTGATTTCTTGGTTTTACCCAGCGTCTGTCGATCGCCGGCATCGCCAGTCCTTGCTGTTTCTGTCAGATATCTCTATCAGGCACAAAGTTCTGGTTGTTGAAGTAGTGCTAGGGAAAATGAACAAGAAGAAGAAACAAGTTGATAAGCATGGACCTTTACATGGTCATATGGATACACATGATGAAGAAATGGATATAAGGAAGATTATGAAAGATGTCGAAACTTTTGGATACTCGCATATGTCATGGAAAGAACGTAAAAAGATTGAAGATAAGAAGGTTGTTTCTCTTGGCGGGAAGGCCCCTAAGCAGCAGAGATTGCCTTTAAGTGTGGCTCGACCAAGGATGAAGAAACAGAAGGAGAGAGAGCGGCAAATGCTCCATGAGCGTTTGATTCTTGGACAATTTGGGGGAAAGCTTGAGGGTAGCAGTAAAAAATCAGCGGGGAAGCGCAGACCTGAGGAGAGGGGTCTGAAGTCAGGTGAAGGTCGTTTCAAAAACGGTGTCCTTAATGTGAAGCATTTATTGAATCCAGCGCAGTCTAAAGATCAAACCACTGAAACCCACGGACTCAGTGGAGGGAAATGGAAAAAAGGAAATAAGAAGGGAGGTAAGAAGCGCCGTTGA	1365	0.4322	MEPRRRRSSSGILLTNLCSLLLVVLCFSGSARAYKNYTVGDSLGWFDNLEKPGVDYQKWASDKKFSLGDFLIFNTDTNHSVIQTYNHTTYTQCDYDDAQDKDTTQWSSSNPSNTEIRPVTVAVPLVKEGTTYFFSSDDDGEQCENGQRFQINVTYGKGLPKSLRNDPNYVDPSSSPSPASSPISGSDDVVPDTIINTNFTNPKGSTSDKDDEDDDDDNVKSTSGSVSALILQNFITSFVGFLFCLGLISWFYPASVDRRHRQSLLFLSDISIRHKVLVVEVVLGKMNKKKKQVDKHGPLHGHMDTHDEEMDIRKIMKDVETFGYSHMSWKERKKIEDKKVVSLGGKAPKQQRLPLSVARPRMKKQKERERQMLHERLILGQFGGKLEGSSKKSAGKRRPEERGLKSGEGRFKNGVLNVKHLLNPAQSKDQTTETHGLSGGKWKKGNKKGGKKRR	454

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele28g1845	454	MobiDBLite	consensus disorder prediction	158	222	-	-
	Lele28g1845	454	MobiDBLite	consensus disorder prediction	167	204	-	-
	Lele28g1845	454	Gene3D	-	33	155	IPR008972	-
	Lele28g1845	454	FunFam	Early nodulin-like protein 18	34	156	-	-
	Lele28g1845	454	Pfam	Plastocyanin-like domain	45	147	IPR003245	GO:0009055
	Lele28g1845	454	MobiDBLite	consensus disorder prediction	390	408	-	-
	Lele28g1845	454	MobiDBLite	consensus disorder prediction	423	437	-	-
	Lele28g1845	454	Pfam	Domain of unknown function (DUF4602)	303	397	IPR027973	-
	Lele28g1845	454	PANTHER	PROTEIN FAF1	284	453	-	-
	Lele28g1845	454	CDD	Phytocyanin	35	153	-	-
	Lele28g1845	454	ProSiteProfiles	Phytocyanin domain profile.	35	155	IPR003245	GO:0009055
	Lele28g1845	454	MobiDBLite	consensus disorder prediction	375	454	-	-
	Lele28g1845	454	SUPERFAMILY	Cupredoxins	35	153	IPR008972	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele28g1845	Lele-ChrLele28	21873748	21878799	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele28g1845	18	213	Phytocyanin Superfamily	AT1G08500	55.276	3.22e-72	226