Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1839 ATGGCCACCGGAGCTTGTTTGCAGAATGAACTGCAAAGGGGTGAAAATAAGCCGAAGAATGTAGCAGCAGAAGGACGGAATCGACGGGTTCTCCAGGATATTGGGAATCTTGTGGATGTTTCTAAGCGCATCCCAAGGCAAGAAGCAGAGAAGAACAAGAAACCAAGCTTTGCAACAACGAAAGTATTAGCAGCAGAGAAGGTTGTTCACCCAGAAGGACCTGAAGTTATTATAATTAGCTCTGATGAAGAAAGTGAGGAAGTAATGGAGAAGAAGAAGAAGAAAGAACCTGCGAAAGCAATAAACTCAAAACAAAACTCAACTAAGAAGAATGTGAAGACCCTCCATGCAATCCTCTCTGCTAGAAGCAAGGCTGCTTGTGGACGTACTTGCAAGCCAAAGAAGGATCACGTGCAAGACGTTGATGCAGCAGACATTGACAATGAATTGGCAGCTGTTGAGTACATTGACGAACTCTACAAGTTCTACAAATTTGCAGAAAGTGATAGCCGTGTGTACGATTACATGGGATCACAATCTGATGTGAATGCTAAGATGAGAGCAATTCTTGTAGACTGGTTGATAGAAGTACACCGTAAATTTGAACTCATGCCTGAAACTCTTCATCTGACTATAAACATCGTGGACCGTTTCCTTTCCTTGAAGGTTGTTTCCAGAAAGGAGCTTCAGCTTGTTGGCATCAGTTCCATGCTCTTGGCCTGCAAATATGAAGAGATTTGGTCTCCAGAGGTGAATGACTTTGTGTGCATATCAGATAATGCATATAAAAGAGAACAGGTTCTAGGGATGGAGAAAACAATCTTAAGGAAGCTAGAATGGTATTTAACTGTTCCTACACCATACGTCTTCCTTGTCCGGTATATCAAAGTCTCTTCTCCCTCAGAGAAGGAGATGGAGAACATGGCGTACTGCTTAGCTGAACTCAGCCTAGTTCACTATACCACTGTAATATTGTATAGTCCCTCTGTTATAGCTGCTTCTGCTGTTTATGCAGCTCGCTTTACCCTTGGTAGGAGCCCTTTCTGGACAGAGACTCTAGAACATTACACAGGCTTTTCTGAGGATCAATTAAGGGAATGTGCTAAGCTCATGGTGAGCTTTCACGCGCTGGCTGGTGAAAGCAAGTTGAAAGCAGTTTACAAGAAATTCTGTAATCCAGAACGTTGTTCTGTTGCTCTTATTCCTCCAGCGAAAGCTTTGCTAGTAGAGAATTCCAGATGA 1242 0.4291 MATGACLQNELQRGENKPKNVAAEGRNRRVLQDIGNLVDVSKRIPRQEAEKNKKPSFATTKVLAAEKVVHPEGPEVIIISSDEESEEVMEKKKKKEPAKAINSKQNSTKKNVKTLHAILSARSKAACGRTCKPKKDHVQDVDAADIDNELAAVEYIDELYKFYKFAESDSRVYDYMGSQSDVNAKMRAILVDWLIEVHRKFELMPETLHLTINIVDRFLSLKVVSRKELQLVGISSMLLACKYEEIWSPEVNDFVCISDNAYKREQVLGMEKTILRKLEWYLTVPTPYVFLVRYIKVSSPSEKEMENMAYCLAELSLVHYTTVILYSPSVIAASAVYAARFTLGRSPFWTETLEHYTGFSEDQLRECAKLMVSFHALAGESKLKAVYKKFCNPERCSVALIPPAKALLVENSR 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1839 413 PIRSF Cyclin_A_B_D_E 4 413 IPR039361 -
Lele28g1839 413 FunFam G2/mitotic-specific cyclin-1 273 399 - -
Lele28g1839 413 Gene3D - 172 283 - -
Lele28g1839 413 SUPERFAMILY Cyclin-like 147 282 IPR036915 -
Lele28g1839 413 Gene3D - 159 399 - -
Lele28g1839 413 MobiDBLite consensus disorder prediction 1 27 - -
Lele28g1839 413 Pfam Cyclin, C-terminal domain 285 403 IPR004367 -
Lele28g1839 413 CDD CYCLIN 283 372 IPR013763 -
Lele28g1839 413 MobiDBLite consensus disorder prediction 1 15 - -
Lele28g1839 413 ProSitePatterns Cyclins signature. 187 218 IPR006671 -
Lele28g1839 413 SMART Cyclin_C_2 285 404 IPR004367 -
Lele28g1839 413 SUPERFAMILY Cyclin-like 284 405 IPR036915 -
Lele28g1839 413 PANTHER CYCLINS 104 389 IPR039361 -
Lele28g1839 413 Pfam Cyclin, N-terminal domain 170 282 IPR006671 -
Lele28g1839 413 SMART cyclin_7 289 373 IPR013763 -
Lele28g1839 413 SMART cyclin_7 192 276 IPR013763 -
Lele28g1839 413 CDD CYCLIN 186 275 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1839 Lele-ChrLele28 21834841 21837047 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1839 14 402 Core Cell Cycle Gene Families AT2G26760 54.198 9.71e-143 410