Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1825 ATGATCTATGTCGGTGTTGAACTTACTGAGATAAAATCTGAAGACCTTCGCTGCCAGGGGTATGGAACTAACACTGCTGCTCTTAGCACTGCTCTGTTCAACAATGGCCAGAGCTGTGGTTCTTTCTTTGAGATTAAGTGTGCCAAGGACATAAATGATATCATAGCAATTAATATTTGGACACATCCAAGAGATCAAAACACTGAAATGGAACATCCAGTCCGAGGAGAATCTTGCACTTCAAATTCAACTCCAAAATGGAAATATGATTTCTTGAGTTTTGCTGGAAAAGTCACTCGCTTGAAGTTTATCGATCATTTAGATGAAGCTTTCAATAGAAGTGGCATCAAAACGTTTCGGGATGACGTAGATCTTGAGAGAGGGCGAGGCATAAAACGGGATCTCTTCCAAGCAATTCAGGATTCTCTCTGTGCAGTTCTTAATTATCTCTGA 453 0.404 MIYVGVELTEIKSEDLRCQGYGTNTAALSTALFNNGQSCGSFFEIKCAKDINDIIAINIWTHPRDQNTEMEHPVRGESCTSNSTPKWKYDFLSFAGKVTRLKFIDHLDEAFNRSGIKTFRDDVDLERGRGIKRDLFQAIQDSLCAVLNYL 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1825 150 PANTHER TMV RESISTANCE PROTEIN N-LIKE 85 146 - -
Lele28g1825 150 ProSiteProfiles TIR domain profile. 86 150 IPR000157 GO:0007165
Lele28g1825 150 Gene3D - 82 149 IPR035897 -
Lele28g1825 150 Gene3D - 11 81 IPR036908 -
Lele28g1825 150 SUPERFAMILY Toll/Interleukin receptor TIR domain 80 146 IPR035897 -
Lele28g1825 150 Pfam TIR domain 91 146 IPR000157 GO:0007165
Lele28g1825 150 SUPERFAMILY Barwin-like endoglucanases 19 50 IPR036908 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1825 Lele-ChrLele28 21613275 21615458 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1825 15 67 Expansin Gene Family AT3G55500 56.604 1.51e-12 61.2