Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1807 ATGCTTCTGTCTCTCGTGATTTTTATATCCACTGGACCTGAATCATGTCATGTAAGTGGTGCTGCAACACCTTCACAGCTCAGGAACTTTGCTTTGTGTCAGCATCTTGTGTGTCTTGGCAGGATCTCCATCCTCAGCATTGCATACTCCTCTAGATCTGTTGGGGAGAGGTCGTCAGCCAAGGAAAAAATGTTGACGGCAATGGAGGCTGGGGGCGAAGGAGGGAAGCCGAAGTCTCAAATTGAGACAAGTAAGAATTCAAATTCTTCAGAACGAAAAGCTGCATCACAAACTTCAGAACCAACCATTAGCAGATCTATATCTTCTAATCTTAAATCCTTCAGCTTCAATGATCTAAAAGAAGCCACAAAGAATTTCAGACAAGAAAACTTAATTGGGGAAGGAGGATTTGGGTTTGTTTACAAGGGATGGATTAATGAGAACTCCTTCGCTCCCACGAGACCGGGTAGCGGGATCATGGTGGCCATCAAGAAACTTAAGCCAGAAAGCTTTCAAGGCCACAAGGAATGGCTTGCAGAAGTCAATTATCTAGGTCAACTCCACCATGAGAATATAGTGAAACTTATAGAAGGAGTTCAGCCTTTATCGTGGGCTGTGCGGATCAATATTGCCGTTGGAGTTGCTAGAGGGTTAGCATTTTTGCATAACTTGGATGCAAATGTTATCTACCGTGACTTAAAGGCTTCTAATGTATTACTTGATTCACAATTGCTTTGCTTGCTTGAGTATGTGCTTAAAGGGAGAAGGGCGGTAGAGGTTGACAAACTCGGAATTGCTTGGGAATCTCTGGTCGATCGGGCGATGCCATTTCTTAAAGATGGCAAGCGGGTTTCAAGAATCATTGATACGAGGTTAGGTGGTCAATACTCGAAAACTGGAGCTCAAGCTGCAGCTGCACTAGCATATCAATGCCTAGATGAGGATCCAAAATACAGACCAACTATGACACAGGTTCTAACCACATTGGAAGAATTCTATTCCTCAAACACAATAATCCCCAGGACCCCTCCAAAGTCTGAATCTGGGAACGATACCCTCAACCATGCTCGTCATTCCCTAAGGTCACCCAGAAATACGCGCCGACGATAA 1110 0.4423 MLLSLVIFISTGPESCHVSGAATPSQLRNFALCQHLVCLGRISILSIAYSSRSVGERSSAKEKMLTAMEAGGEGGKPKSQIETSKNSNSSERKAASQTSEPTISRSISSNLKSFSFNDLKEATKNFRQENLIGEGGFGFVYKGWINENSFAPTRPGSGIMVAIKKLKPESFQGHKEWLAEVNYLGQLHHENIVKLIEGVQPLSWAVRINIAVGVARGLAFLHNLDANVIYRDLKASNVLLDSQLLCLLEYVLKGRRAVEVDKLGIAWESLVDRAMPFLKDGKRVSRIIDTRLGGQYSKTGAQAAAALAYQCLDEDPKYRPTMTQVLTTLEEFYSSNTIIPRTPPKSESGNDTLNHARHSLRSPRNTRRR 369
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1807 369 ProSitePatterns Serine/Threonine protein kinases active-site signature. 228 240 IPR008271 GO:0004672|GO:0006468
Lele28g1807 369 Pfam Protein tyrosine and serine/threonine kinase 129 197 IPR001245 GO:0004672|GO:0006468
Lele28g1807 369 ProSitePatterns Protein kinases ATP-binding region signature. 132 165 IPR017441 GO:0005524
Lele28g1807 369 SUPERFAMILY Protein kinase-like (PK-like) 102 336 IPR011009 -
Lele28g1807 369 ProSiteProfiles Protein kinase domain profile. 126 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1807 369 Gene3D Transferase(Phosphotransferase) domain 1 197 246 - -
Lele28g1807 369 MobiDBLite consensus disorder prediction 337 369 - -
Lele28g1807 369 Gene3D Phosphorylase Kinase; domain 1 95 196 - -
Lele28g1807 369 FunFam Serine/threonine-protein kinase BIK1 91 200 - -
Lele28g1807 369 SMART serkin_6 126 333 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1807 369 MobiDBLite consensus disorder prediction 68 104 - -
Lele28g1807 369 PANTHER OS01G0588500 PROTEIN-RELATED 251 331 - -
Lele28g1807 369 MobiDBLite consensus disorder prediction 79 104 - -
Lele28g1807 369 Gene3D Transferase(Phosphotransferase) domain 1 247 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1807 Lele-ChrLele28 20979718 20987213 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1807 77 329 Glycoside Hydrolase AT3G07070 30.539 6.97e-37 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Lele28g1807 PK_Tyr_Ser-Thr 4.2e-08 CL0016