Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1805 ATGAGAAACGACACGCACACGCCGGCGACCACGAAAACAAAAGGAGGAGGACGACAGGATATCGACCCACGTGTGATCTTAGAATCAGATGCTTGTATTGTTATTGAGCTGTTCTCTAATGAACCTGATGAGCTCCTTGCTGATTACAGTATCATCCGAGAGATTAAGTTGGGAGTAATTGGTGGGGCTGTCTTAGAATTCGTAGAAACTTCTGGGCAATCATATACTGAAGACCATCTCACAGATTTCCAGGGTAATTTTCTTTCAACCATATGGCTCGTCTCTTCCTTCAATATATTTGTGTCTGTTGCTTTATCATCTTCTTATGAGCAGTCTAAAACCAAGCGTCGTATAGGTAAATATGAGGTGGGAAGGACCATTGGTGAGGGAACATTTGCAAAAGTTAAATTTGCAAGGAACACTGAGACTGGGGAGCCTGTGGCTATCAAAATTCTGGAGAAAGAGAAGGTTCTCAAGCACAAGATGGCTGAGCAGGTAATGGGGAGCAGGACAAAAATATATATAGTTTTGGAGTTTGTGACTGGAGGAGAGCTCTTTGACAAAATTGATGATGGACTGCTTCATACTACATGTGGAACTGCAAATTATGTTGCTCCTGAGGTCCTGGATGATGGAGGCTATGATGGAGCAACTGCAGACTTGTGGTCTTGTGGAATCTCTGCTGCTGAATTTACTTGTCCCCCATGGATTTCATTCAGGGCCAGGAAATTGATAACTCGAATTTTGGATCCTAACCCTTCAACTCGTATCACTATATCTGAAATCTTGGCCGATGATTGGTTCAAGAAAGATTATAAGACTCCAGTTTTTGAGGAGACGGGGGAGACCAACCTTGATGACATTGAAGCTGTCTTTAGAGATTCTGAAGAACACCTTGTGACGGAAAAGAAGGAAGAACAGCCAACAGCCATCAATGCATTTGAATTAATTTCCATGTCCAAAGGACTAAACCTCGAAAACTTGTTTGATATAGAGCAGAAGAAAAACTACAAGATATTTCAAGTGGCACCTTCTTTTCACATGGTTGAGGTGAGGAAAGCAAAAGGTGATACATTGGAGTTTCACAAGATTGTCTGGTGTGAAGTCTTGAGTTTAGGTGACAAACTTTCTGTAGCTTCTACAGATAATAGTTGCATAACTATATTATCTGAGGCCGTATCAAAGATGGGTGGGAATTATCCAGTTCATGTCTTAACATTGCCAACTGCTTTTCCTCCATCTTTGATATCCTTACCTGGGAATTTGTCCAACGGCATCCCGTATCTTCCATGTAGATCCCAAACAAGATTCAACAGAATGAGAGCTATGTCAGCTGATGCGAGGCCTGGAGAAACATCATCTGCTTCAGAAGCAAAGAATCCTCTAGCTGTTTTTTTAGACTTTCCTCGTGCTGTTTGGAGGCAAACACTACGTCCATTAAGTGATTTTGGGTTTGGTTGGAGGAGCGTCTGGGAAGGTGGGGTTGGACTGCTTTTAATATCAGGTTCAGTTTTACTTGCTCTTAGTTTGGCCTGGTTGAGGGGTTTTCAAATAAGGTCCAAATTCAGGAAGTACACAGCAGTCTTTGAGTTTGCTCAGGCTTGTGGTATATGCAGTGGAACGCCTGTAAGGATCAGAGGTGCAACTGTTGGCAATGTCATTCGTGTTAATCCTTCCTTAAAATGTATCGAAGCAATTGCTGAGATGGAAGATGATAAAACAATCATACCACGAAATTCGCTGGTTGAAGTTAACCAGTCAGGTCTGCTCATGGAAACTTTGGTTGACATTACTCCTCGAGACCCCATTCCAACACCATCAGTTGGACCTCTTGACCCAGAATGTCCCAAAGAAGGTCTCATTGTGTGTGATCAAGAAAGGATCAAGGGATATGAAGGAGTTAGTTTGGATGCATTGGTTGGGATATTTACCCGCCTCGGACGAGATGTAGAGGAAATTGGTATTGCTAATAGCTATTCATTGGTTGAAAGAGTTTCTTCTGTTATTGAAGACGCAAAGCCCCTTCTTATAAAGATCAAAGCCATGGCTGATGATGTTCAACCTTTGTTGGCTGAAGTTCATGAGACTGATCTGTTGAAGGAGGTTGAGAATTTGACCCGGAGCCTTACTCAAGCCTCTGAAGATTTGAGAAGGGTGCATTCGTCCATCTTGACCCCTGAGAACACTGAACTTATTCGCAAGTCTATTTATACTCTCATATTCACCCTGAGGAACATTGAGAATATTAGCTCTGATATATTGGGTTTCACTGGTGATCAGGCCACAAGAAGGAATTTGAAATCACTCATCAACTCTCTCAGCAGGTTATTGTAA 2334 0.4225 MRNDTHTPATTKTKGGGRQDIDPRVILESDACIVIELFSNEPDELLADYSIIREIKLGVIGGAVLEFVETSGQSYTEDHLTDFQGNFLSTIWLVSSFNIFVSVALSSSYEQSKTKRRIGKYEVGRTIGEGTFAKVKFARNTETGEPVAIKILEKEKVLKHKMAEQVMGSRTKIYIVLEFVTGGELFDKIDDGLLHTTCGTANYVAPEVLDDGGYDGATADLWSCGISAAEFTCPPWISFRARKLITRILDPNPSTRITISEILADDWFKKDYKTPVFEETGETNLDDIEAVFRDSEEHLVTEKKEEQPTAINAFELISMSKGLNLENLFDIEQKKNYKIFQVAPSFHMVEVRKAKGDTLEFHKIVWCEVLSLGDKLSVASTDNSCITILSEAVSKMGGNYPVHVLTLPTAFPPSLISLPGNLSNGIPYLPCRSQTRFNRMRAMSADARPGETSSASEAKNPLAVFLDFPRAVWRQTLRPLSDFGFGWRSVWEGGVGLLLISGSVLLALSLAWLRGFQIRSKFRKYTAVFEFAQACGICSGTPVRIRGATVGNVIRVNPSLKCIEAIAEMEDDKTIIPRNSLVEVNQSGLLMETLVDITPRDPIPTPSVGPLDPECPKEGLIVCDQERIKGYEGVSLDALVGIFTRLGRDVEEIGIANSYSLVERVSSVIEDAKPLLIKIKAMADDVQPLLAEVHETDLLKEVENLTRSLTQASEDLRRVHSSILTPENTELIRKSIYTLIFTLRNIENISSDILGFTGDQATRRNLKSLINSLSRLL 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1805 777 Gene3D Kinase associated domain 1, KA1 305 336 - -
Lele28g1805 777 Gene3D Kinase associated domain 1, KA1 337 376 - -
Lele28g1805 777 MobiDBLite consensus disorder prediction 1 20 - -
Lele28g1805 777 Pfam MlaD protein 524 599 IPR003399 -
Lele28g1805 777 Pfam NAF domain 308 338 IPR004041 GO:0007165
Lele28g1805 777 ProSitePatterns Protein kinases ATP-binding region signature. 127 150 IPR017441 GO:0005524
Lele28g1805 777 SMART serkin_6 121 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1805 777 Gene3D Transferase(Phosphotransferase) domain 1 178 294 - -
Lele28g1805 777 Coils Coil 695 715 - -
Lele28g1805 777 ProSiteProfiles Protein kinase domain profile. 1 268 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1805 777 PANTHER PROTEIN TRIGALACTOSYLDIACYLGLYCEROL 2, CHLOROPLASTIC 412 777 IPR039342 -
Lele28g1805 777 SUPERFAMILY Protein kinase-like (PK-like) 111 277 IPR011009 -
Lele28g1805 777 Gene3D Phosphorylase Kinase; domain 1 111 171 - -
Lele28g1805 777 ProSiteProfiles NAF domain profile. 306 330 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1805 Lele-ChrLele28 20961108 20977630 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1805 111 334 CBL-interacting serine-threonine protein kinases AT2G26980 50.301 4.91e-94 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele28g1805 MlaD 6.8e-11 No_clan