Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1797 ATGAAGCTTGGGATAATTTTCTCTGTTCTTTTGCTTCTGTTTTCTCCGTCGCAAGCTGCAGTTTTTAGCGTAGATCTAGGTTCTGAGTGGGTCAAAGTAGCGGTCGTAAATCTGAAACCTGGGCAGAGTCCAATATCGGTAGCCATCAATGAGATGTCGAAGAGGAAATCTCCGGCCTTGGTATCATTTAACTCGGGTGATCGTCTACTAGCCGAAGAAGCAGCCGGTCTGGTGGCTCGGTATCCTCAAAACGTCTATTCCCAGATCAGGGACTTGATTGGCAAACCGTATAATTTCTCTAAGAAACTTTTGGATTCAGTGTACTTGCCATTTGAAATCAAGGAAGATTCGAGGGGCACTGCGAGTGTTATAGTCGACGCTAATGGCACTGAGTATTCTGCTGAGGAATTGGTGGCAATGGTTTTGACCTATGCTGTTAATTTAGCGGAATTCCATTCCAAAATTCCTATCAAAGATGCCGTAATCACCGTACCGCCTTACTTTGGGCAAGCTGAACGAACTGGGTTGCTTCAGGCAGCCCAATTGGCAGGAATTAATGTTCTTTCTTTGATAAACGAGCATTCTGGTGCCGCATTACAATACGGGATTGACAAGGACTTTTCAAATCAGTCAAGGCACGTCATATTCTATGACATGGGTTCAAGCAGTACCTATGCCGCACTTGTGCACTTCTCAGCGTACCCAAGTAAAGAATATGGAAAGACGGTATCAGTTAATCAGTTTCAGGTTAAGGATGTCTATTGGAATCCAGAGCTGGGTGGTCAAGATATGGAATTGCGACTGGTGGAGCACTTTGCTAATGAATTTAATAAGCAAGTTGGTGATGGATTTGATGTGAGAAAGTATCCTAAAGCTATGGCTAAATTAAAGAAGCAGGTTAAACGAACCAAAGAAATTCTTAGTGCAAACACGGCTGCTCCAATTTCAGTTGAGTCACTTCATGCAGATACAGACTTCAGGAGTACTATCACCCGTGAGAAGTTTGAAGAGCTCTGTGGGGATATCTGGGAAAAATCTCTTTTGCCTGTGAAAGCGTTGCTTGACAATTCAGGCCTGGCAGCTGACCAAATATACGCAGTGGAGTTGCTAGGAGGTGCAACCAGAGTTCCCAAACTACAGGCTAAGCTTCAAGAGTTCTTTGGGAGGAAAGAACTTGACAGACATCTTGATGCTGATGAAGCTATAGTTCTTGGCGCCTCACTATACGCTGCAAATTTAAGTGATGGAATTAAATTGAACCGGAAGCTTGGAATGATTGATGGGTCAATGTATGGATTTGTGGTTGAGTTGAATGGCCCTGATCTTTTGAACGATGAAAGTGCTAGGCAATTACTTGTACCACGAATGAAAAAAATCCCAAGCAAGATGTTCAGATCAGTTATCCATAACAAAGATTTTGAGGTTTCACTAGCTTATGAGAGTGAAAATCTTTTGCCACCTGGCATTACCTTTCCTGAAGTTGATCGATATCAAGTATCTGGTTTGACAGCTGCAACTGAGAAGTACTCGTCTCGGAACTTGTCCTCTCCTATAAAAGCAAACCTACATTTCTCTCTGAGTAGAAGTGGTATCCTTACTTTGGATCGGGCAGATGCTGTTATTGAAATAACAGAGTGGGTGGAAGTTCCTAGAAAGAATCTGACCATAGAGAATTCTACTACAGATTCTTTGAACTTGACAATGGAAACTGGTGGTAGGAATAGTTCTGAGGAAAACAGTGAAAAGTTACAAACTGATGGAGGGGTTAGTGAGACATTGAATACTAGTGCAGAGGATCAAACTGCCACAGATTCTGGTCCAGAGAAAAAGCTGAAGAAGCGAACCTTTAGGGTTCCATTGAAGGTTGAATCAAAGCTAGTGGGACCTGGAACGTCTCTGTCAAAAGAGTTTCTTGCGGAAGCTAAGGGCAAACTAGAGGCACTGGACAAGAAAGATGCAGAGAGAAGAAGAACAGCAGAATTAAAAAATAACTTAGAAGGATATATATACTCAACTAAGGAAAAGATCGAAACTTTGGATGATTGTGCAAAAGTTTCTACTGAGGATGAACGCCAACTGTTTGTTGAGAAGCTTGATCAGGTGCAAGATTGGTTGTATACAGATGGAGAAGATGCCAATGCTACAGAGTTTGAAGAGCGTCTAGATATGTTAAAAGCAGTGGGTGATCCAATTTTTTTCAGATTGAAGGAGCTCACCTCTCGACCCGTGGCAGTTGACCATGCTCGTAAATACCACAAGGAGCTGCAACAGATTGTACAAGAGTGGAAGACAAAAAAGTCTTGGCTTCCAAAAGAAGAAATAGATGGGGTTGTAAAAGATGCTGAAAAGTTAAAGAATTGGTTGGACGAGAAGGAGGCTGAGCAGGCTAAGACTTCTGCGTTTAGCAAGCCAGCATTTACTTCCGATGAAGTATATCTGAAGGTGTTTGATCTGCAAAGCAAGGTTGCCAAGATCAATAGAATCCCCAAACCCAAGCCTAAAATCCAGAAGCCTACAAAGAATGAAACTGAGAAGAACAACACAGACACTTCAGACTCCACCTCAACTCCCGAAAGTGATCAACCAGCAAACGAAAGCTCAGAAGCTCATGATGCTCCCCAAAGCGATCAAGCTGGGGACAACACGGAAGGTTCAACAAAGGAAGTGATTGATGAGCAACCCCAAGCTCATGATGAATTATGA 2703 0.4269 MKLGIIFSVLLLLFSPSQAAVFSVDLGSEWVKVAVVNLKPGQSPISVAINEMSKRKSPALVSFNSGDRLLAEEAAGLVARYPQNVYSQIRDLIGKPYNFSKKLLDSVYLPFEIKEDSRGTASVIVDANGTEYSAEELVAMVLTYAVNLAEFHSKIPIKDAVITVPPYFGQAERTGLLQAAQLAGINVLSLINEHSGAALQYGIDKDFSNQSRHVIFYDMGSSSTYAALVHFSAYPSKEYGKTVSVNQFQVKDVYWNPELGGQDMELRLVEHFANEFNKQVGDGFDVRKYPKAMAKLKKQVKRTKEILSANTAAPISVESLHADTDFRSTITREKFEELCGDIWEKSLLPVKALLDNSGLAADQIYAVELLGGATRVPKLQAKLQEFFGRKELDRHLDADEAIVLGASLYAANLSDGIKLNRKLGMIDGSMYGFVVELNGPDLLNDESARQLLVPRMKKIPSKMFRSVIHNKDFEVSLAYESENLLPPGITFPEVDRYQVSGLTAATEKYSSRNLSSPIKANLHFSLSRSGILTLDRADAVIEITEWVEVPRKNLTIENSTTDSLNLTMETGGRNSSEENSEKLQTDGGVSETLNTSAEDQTATDSGPEKKLKKRTFRVPLKVESKLVGPGTSLSKEFLAEAKGKLEALDKKDAERRRTAELKNNLEGYIYSTKEKIETLDDCAKVSTEDERQLFVEKLDQVQDWLYTDGEDANATEFEERLDMLKAVGDPIFFRLKELTSRPVAVDHARKYHKELQQIVQEWKTKKSWLPKEEIDGVVKDAEKLKNWLDEKEAEQAKTSAFSKPAFTSDEVYLKVFDLQSKVAKINRIPKPKPKIQKPTKNETEKNNTDTSDSTSTPESDQPANESSEAHDAPQSDQAGDNTEGSTKEVIDEQPQAHDEL 900
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1797 900 FunFam Heat shock 70 kDa protein 4 633 745 - -
Lele28g1797 900 ProSitePatterns Heat shock hsp70 proteins family signature 3. 367 381 IPR018181 -
Lele28g1797 900 Gene3D - 87 140 - -
Lele28g1797 900 PANTHER HSC70CB, ISOFORM G-RELATED 19 864 - -
Lele28g1797 900 MobiDBLite consensus disorder prediction 560 612 - -
Lele28g1797 900 Gene3D Actin; Chain A, domain 4 260 345 - -
Lele28g1797 900 Gene3D - 633 745 IPR029048 -
Lele28g1797 900 FunFam Heat shock 70 kDa protein 4 260 345 - -
Lele28g1797 900 MobiDBLite consensus disorder prediction 848 884 - -
Lele28g1797 900 Gene3D - 206 393 - -
Lele28g1797 900 SUPERFAMILY Actin-like ATPase domain 21 205 IPR043129 -
Lele28g1797 900 PRINTS 70kDa heat shock protein signature 396 416 - -
Lele28g1797 900 PRINTS 70kDa heat shock protein signature 52 64 - -
Lele28g1797 900 PRINTS 70kDa heat shock protein signature 160 180 - -
Lele28g1797 900 PRINTS 70kDa heat shock protein signature 20 33 - -
Lele28g1797 900 PRINTS 70kDa heat shock protein signature 364 380 - -
Lele28g1797 900 MobiDBLite consensus disorder prediction 581 602 - -
Lele28g1797 900 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 421 568 IPR029047 -
Lele28g1797 900 SUPERFAMILY Actin-like ATPase domain 211 413 IPR043129 -
Lele28g1797 900 MobiDBLite consensus disorder prediction 885 900 - -
Lele28g1797 900 Pfam Hsp70 protein 22 733 IPR013126 GO:0005524|GO:0140662
Lele28g1797 900 MobiDBLite consensus disorder prediction 825 900 - -
Lele28g1797 900 CDD HYOU1-like_NBD 23 411 - -
Lele28g1797 900 Gene3D - 24 411 - -
Lele28g1797 900 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 660 741 IPR029048 -
Lele28g1797 900 MobiDBLite consensus disorder prediction 560 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1797 Lele-ChrLele28 20883554 20891444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1797 17 735 Calmodulin-binding Proteins AT3G12580 27.446 1.31e-66 233