Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1796 ATGCATATAAACCAGCTAGGGTTTTTATCATCGAGCGCGGAGGCCAAGGGAGAAGGAGGACTCAGTCACCGGAGGCAGAAATTCCTGAAAATGGTGAAGTTCTTGAAGCAGAACAAGGCCGTTATTCTCCTTCAGGGACGCTATGCTGGTCGCAAAGGAGTGATCGTACGTACCTTCGACGACGGCACGCGTGACCGTGCGTACGGCCACTGTTTGGTTGCCGGAATCAAGAAGTACCCAAGCAAGGTCATCAAGAAGGATTCCGCTAAGAAGACGGCCAAGAAATCTAGGGTGAAGGCTTTCGTCAAGCTCGTGAACTACCAGCATCTCATGCCTACTCGCTACACGCTCGATGTGGATCTTAAGGACGTAGTGACCATCGATGCCCTTCAATCTAAGGACAAGAAGGTTACCGCCTTGAAGGAGACCAAGAAGAGGTTCGAGGAGAGGTTCAAGACCGGCAAGAACAGGTGGTTCTTTACCAAGCTTAGGTTCTGA 498 0.508 MHINQLGFLSSSAEAKGEGGLSHRRQKFLKMVKFLKQNKAVILLQGRYAGRKGVIVRTFDDGTRDRAYGHCLVAGIKKYPSKVIKKDSAKKTAKKSRVKAFVKLVNYQHLMPTRYTLDVDLKDVVTIDALQSKDKKVTALKETKKRFEERFKTGKNRWFFTKLRF 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1796 165 Gene3D - 31 165 IPR038655 -
Lele28g1796 165 SUPERFAMILY Translation proteins SH3-like domain 33 165 IPR008991 -
Lele28g1796 165 ProSitePatterns Ribosomal protein L27e signature. 154 165 IPR018262 GO:0003735|GO:0005840|GO:0006412
Lele28g1796 165 Pfam Ribosomal L27e protein family 82 165 IPR001141 GO:0003735|GO:0005840|GO:0006412
Lele28g1796 165 PANTHER 60S RIBOSOMAL PROTEIN L27 31 165 IPR001141 GO:0003735|GO:0005840|GO:0006412
Lele28g1796 165 FunFam 60S ribosomal protein L27 31 165 - -
Lele28g1796 165 Coils Coil 130 150 - -
Lele28g1796 165 CDD KOW_RPL27 36 118 IPR041991 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1796 Lele-ChrLele28 20870552 20871049 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1796 31 165 Cytoplasmic Ribosomal Protein Gene Family AT3G22230 85.926 8.30e-85 243