Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1793 ATGCTTCAAAGCTTGGTCCCTCGATCCTCACTTTCTGAGAATCCAAACGGTGGTGCTTCTTCCTCCATGAAGACCAAGCGCTTGGACCGCGACCTTGATGACGCCGGCGATGATCCTTCCTCCTTTAAGAGGCCCAGCTCCGGCAGGAATTTCTCCGGTGAGGCTTCTGTCTCCGGTGAGAAGACTGTTGAGGAAGGGCAGGGGCATGAGGATCAGGAGCCACCTTTGGAAGGAACAGAGTCGACCGGTCTCAGACTCCTCGGGCTGTTGCTACAATGCGCCGAGTGCGTCGCCATGGATAACCTCGACGATGCCAGTGACCTCTTGCCGGAGATAGCTGAGCTTTCCTCGCCTTACGGGAATTCGCCGGAACGTGTCGGCGCGTACTTTGCACACGCCCTTCAGGCGCGCGTCGTTAGCTCCTGCCTCGGCGCTTACTCGCCTCTCACCACGAAATCGCACACTCTTGTTCAATCTCAGCGAATCTTTAATGCTTTCCAATCTTACAACTCCGTCTCTCCTCTCGTCAAATTCTCGCACTTCACGGCCAACCAAGCCATCTTCCAGGCCCTCGACGGCGAAGATTGCGTCCACGTCATCGACCTGGACATCATGCAGGGCCTTCAATGGCCAGGATTGTTCCACATCCTCGCCTCCCGGTCGAAGAAGATCCGGTCAATGAGGATCACCGGATTCGGATCCTCAACCGAGTTGCTTGAATCCACCGGCCGGCGACTCGCCGACTTTGCAAGCTCACTCGGCTTGCCGTTCGAGTTCCACCCTGTGGAGGGCAAAATCGGGAACATGACCGAACTGAGTCAACTTGGAGTGAGGCCCAACGAGGCCATAGTGGTCCATTGGATGCACCATTGCTTGTACGATATCACCGGAAGCGATTTGGGGACGTTGAGACTATTGACCCTGTTGAGGCCGAAGCTGATCACGATGGTCGAACAGGATCTGAGTCACGCCGGGAGCTTCCTCGCGAGGTTCGTGGACGCCTTGCATTATTACAGCGCGTTGTTCGACGCGCTCGGGGACGGATTGAGTGGGGATAGCACAGAGAGGCATACGGTGGAGCAGCAGCTGTTTGGGTGCGAGATAAGGAACATCGTGGCCGTCGGTGGGCCCAAGAGAACCGGCGAAGTGAAGGTCGAGAGATGGGGGGATGAGTTTAGAAGGGTCGGATTCCGACCCGTGTCTCTACAGGGCAACCCGGCTGCCCAAGCGAGCCTCTTGTTGGGTATGTACCCTTGGAGAGGGTACACACTGGTGGAAGAGAACGGGTGTCTCAAGTTGGGGTGGAAGGATCTTTCTCTTTTGACCGCGTCTGCGTGGCAGCCGACGGATTAG 1353 0.5684 MLQSLVPRSSLSENPNGGASSSMKTKRLDRDLDDAGDDPSSFKRPSSGRNFSGEASVSGEKTVEEGQGHEDQEPPLEGTESTGLRLLGLLLQCAECVAMDNLDDASDLLPEIAELSSPYGNSPERVGAYFAHALQARVVSSCLGAYSPLTTKSHTLVQSQRIFNAFQSYNSVSPLVKFSHFTANQAIFQALDGEDCVHVIDLDIMQGLQWPGLFHILASRSKKIRSMRITGFGSSTELLESTGRRLADFASSLGLPFEFHPVEGKIGNMTELSQLGVRPNEAIVVHWMHHCLYDITGSDLGTLRLLTLLRPKLITMVEQDLSHAGSFLARFVDALHYYSALFDALGDGLSGDSTERHTVEQQLFGCEIRNIVAVGGPKRTGEVKVERWGDEFRRVGFRPVSLQGNPAAQASLLLGMYPWRGYTLVEENGCLKLGWKDLSLLTASAWQPTD 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1793 450 MobiDBLite consensus disorder prediction 1 23 - -
Lele28g1793 450 ProSiteProfiles GRAS family profile. 77 447 IPR005202 -
Lele28g1793 450 Pfam GRAS domain family 88 447 IPR005202 -
Lele28g1793 450 MobiDBLite consensus disorder prediction 1 80 - -
Lele28g1793 450 MobiDBLite consensus disorder prediction 43 57 - -
Lele28g1793 450 MobiDBLite consensus disorder prediction 24 40 - -
Lele28g1793 450 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 67 442 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1793 Lele-ChrLele28 20856203 20857555 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1793 23 450 GRAS Transcription Factor Family AT5G41920 65.358 0.0 541
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele28g1793 GRAS 5.7e-114 CL0063