Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1769 ATGGAAATAGAGCAAGACACTGCTGTGGCCTCCTGTAATGGAGGCAGAAGTAATGAGAAGAGAGGATTGCATCTGGTGTGGGAAGATTTAGCTGTGGTGGTTCCAAACTTTGGCAATGGACATACCAAGAGGTTGCTTGATAGGTTGAGTGGATTTGCGGAGCCTAACAGAATCATGGCCATCATGGGACCTTCTGGTTCTGGCAAATCCACTCTCCTTGATGCTTTGGCAGGTAGGCTTCCTGGAAATGTTGTCATGACAGGGCATGTTCTTTTAAATGGAAAGAAGAGAGTAGGCCATGGAGTTAAAGCTTATGTGACCCAAGAAGACATATTGTTGGGAACATTAACAGTGAGAGAAACAATATCTTACTCAGCAAAACTTAGGCTTCCAAGCAGCATGACAAAAGAAGAGGTGAATGACATAGTGGAAGGAACAATTATGGAAATGGGTCTTCAACAATGTGCCGATAGGCCAATTGGGAATTGGCACTTGAGAGGAATAAGTGGTGGGGAAAAGAAAAGACTAAGCATAGCACTTGAGATCCTAACAAGACCTTCTCTTTTGTTTCTTGATGAACCTACCAGTGGACTTGATAGTGCCTCTGCATTTTTTGTTGTTCAAACTCTGAGAAATATCGCACATGATGGAAGAACTGTTATCTCCTCCATACATCAACCAAGCAGTGAAGTTTTTGCGCTCTTTGATGATCTCTTCCTTCTCTCTGGTGGTCAAACTGTGTTCTTTGGAGCAGCTAAAATGGCAGTTGAGTTCTTTGCCAAAGCAGGATTTCCATGTCCAAGTAGAAGAAATCCATCAGATCACTTCCTTCGTTGTGTTAATGCAGATTTTGATTCAGTCACCATGGCCATGGTGGCTTCTCAGAAAATACCTGAACAGCATAATTTATCAACTGCAGAAATAAAAGCAATACTCGTTGAGAAATACCAATGGTCAGAATATGCTGCCACAGCAAGATCAAGAATAAAAGAAATCTCAAACACTGGAGGAGAAGAGGGTGAAAGTAAAAGAATGGACCAAACCAAATGGTGGAAGCAGCTGTCAACATTGACACGGAGATCTTTTGTGAACATGTGTAGAGATGCTGGATACTACTGGATAAGGATAATAATCTACGTGGGCTTATCTTTGTGTGTTGGAACTGTGTTTTTCAATGTTGGGACAGGCTATAGAGCAATTTTTGCTAGAGGATCTTGTGGCGCATTCATATCTGGTTTCATGACTTTCATGTCCATTGGAGGCTTCCCATCTTTCATAGAAGAGATGAAGGTGTTTAAGAAAGAGAGGCTCAATAGGTATTATGGCAATGGAGTCTATGTTCTGTCAAACTTTCTGTCTTCGCTTCCTTTCGTGTTTGCCATGTCTTTTGCTACTGGCATTATAACCTTCTATATGGTTAAGTTTCATCCTGGCTTCTCTGTTCTGCTGTACGGATGCATTGATCTTTGTTGCTGCATTGCTGTTGTTGAGACCGCAATGATGATCATAGCTTCACTTGTTCCTAACTTCCTAATGGGAGTCGTTGTCGGAGCAGGATATGTTGGTGTTATGATGATGACTTCTGGATACTTCCGTCTACGTCCTGATCTTCCCAAAGTCTTCTGGCGTTATCCAATCTTATACCTCAATTTTGGAGCATGGGGATTACAGGGGGCTTACAAGAACGACATGATAGGGCTTGAGTTTGATGGTATGAATCCTGGTGACCCAAAAGTGAAAGGAGAATACATTCTAAGAACTATGCTTGGCCTTGAACTTGATCATTCAAAATGGTGGGACTTAGCTGCTGTGGCACTCATCCTCATATCCTTCAGACTTTTCCTCTTCCTTCTTCTCAAGTTCACAGAGTTCTCTTCACCTCTGCTTCGTAAAATCTACACCAAACAAACTCTTCATCGCATCAAGAAGCGTCCTTCTTTCAGAAAACCTGCGTCTTTGTCTTTCCCTTCTAAGAGACACCACCAACCTCTTCATTCTTTGTCTTCTCAGGAAGGTCTTACCTCCCCAATTCATTAG 2037 0.4222 MEIEQDTAVASCNGGRSNEKRGLHLVWEDLAVVVPNFGNGHTKRLLDRLSGFAEPNRIMAIMGPSGSGKSTLLDALAGRLPGNVVMTGHVLLNGKKRVGHGVKAYVTQEDILLGTLTVRETISYSAKLRLPSSMTKEEVNDIVEGTIMEMGLQQCADRPIGNWHLRGISGGEKKRLSIALEILTRPSLLFLDEPTSGLDSASAFFVVQTLRNIAHDGRTVISSIHQPSSEVFALFDDLFLLSGGQTVFFGAAKMAVEFFAKAGFPCPSRRNPSDHFLRCVNADFDSVTMAMVASQKIPEQHNLSTAEIKAILVEKYQWSEYAATARSRIKEISNTGGEEGESKRMDQTKWWKQLSTLTRRSFVNMCRDAGYYWIRIIIYVGLSLCVGTVFFNVGTGYRAIFARGSCGAFISGFMTFMSIGGFPSFIEEMKVFKKERLNRYYGNGVYVLSNFLSSLPFVFAMSFATGIITFYMVKFHPGFSVLLYGCIDLCCCIAVVETAMMIIASLVPNFLMGVVVGAGYVGVMMMTSGYFRLRPDLPKVFWRYPILYLNFGAWGLQGAYKNDMIGLEFDGMNPGDPKVKGEYILRTMLGLELDHSKWWDLAAVALILISFRLFLFLLLKFTEFSSPLLRKIYTKQTLHRIKKRPSFRKPASLSFPSKRHHQPLHSLSSQEGLTSPIH 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1769 678 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 18 644 - -
Lele28g1769 678 MobiDBLite consensus disorder prediction 643 678 - -
Lele28g1769 678 FunFam ABC transporter G family member 11 19 262 - -
Lele28g1769 678 CDD ABCG_EPDR 22 250 - -
Lele28g1769 678 SMART AAA_5 55 244 IPR003593 -
Lele28g1769 678 Pfam ABC transporter 47 196 IPR003439 GO:0005524
Lele28g1769 678 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 25 268 IPR003439 GO:0005524
Lele28g1769 678 ProSitePatterns ABC transporters family signature. 168 182 IPR017871 GO:0005524|GO:0016887
Lele28g1769 678 Gene3D - 19 262 IPR027417 -
Lele28g1769 678 MobiDBLite consensus disorder prediction 659 678 - -
Lele28g1769 678 Pfam ABC-2 type transporter 353 562 IPR013525 GO:0016020|GO:0140359
Lele28g1769 678 Pfam ABC-2 type transporter 225 321 IPR043926 GO:0140359
Lele28g1769 678 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 257 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1769 Lele-ChrLele28 20592012 20598435 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1769 57 239 Calmodulin-binding Proteins AT2G36910 30.198 4.51e-10 61.2