Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1767 ATGGAGATTGAGGATTCGAGTGGTGGACGGAGACATAATGGGAGCGGATTCAGTGCGTTCACGCCGGCCGCAGTGTACGGTGCTCTTGACAGAGGAAGTTGTTTGGTTTGGGAGGATCTGACGGTGGTGATTCCTAACTTCGGCAAGGGACCGACTAAGAGGTTGCTTAATGGACTTCATGGCTACGCCGAGCCTGGTAGAATCATGGCTATAATGGGTCCTTCGGGTTCTGGGAAATCCACCTTGCTCGATTCACTTGCAGGGAGACTCTCAAAAAATGTTGTCATGACTGGAAATATAATGCTCAATGGAAAGAAGAAAAGATTAGATTATGGTGCAGTTGCTTATGTAACTCAAGAGGATGTCTTGCTGGGAACTCTCACTGTCAGGGAAACCATATCTTATTCAGCACATCTACGTCTTCCTACAACAATGAACAAAGAAGAAATTAACGGGATTGTTGATGGAACAATCATTGAAATGGGTCTTCAGGATTGTGCAGATAGGTTGATTGGTAACTGGCACTTGAGAGGCATAAGTGGAGGGGAGAAGAAAAGACTTAGTATTGCACTGGAAATCCTTACAAGGCCTCGCTTATTGTTTCTTGATGAACCCACCAGTGGCCTTGATAGTGCCTCTGCTTTCTTTGTTGTTCAAACTCTTAGAACTGTTGCTCGTGATGGACGGACAGTTATCTCTTCAATTCACCAGCCAAGTAGTGAAGTTTTTGCTCTCTTTGATGACCTTTTCTTACTCTCTGGTGGTGAAACAGTGTATTTTGGAGAAGCAAAGATGGCTGTAGAGTTCTTTGCAGAAGCAGGATTTCCATGTCCACGCAAAAGAAACCCTTCTGATCACTTCTTACGTTGTATCAATTCTGATTTTGACATTGTAACAGCCACTTTGAAGGGATCTCAAAGAATTCGGGATATTCCAAATTCATCAGATCCTTTCATGAACATGGCTACAGCAGAGATTAAGGCTATGCTGGTTGAAAAATATAGGCGTTCAGTTTATGCTAGAACGACAAAAGAAAAGATTCAAGAGCTATCCAACATTGAAGGAATAGAAGCTGAAACACAATCTGGCAGTCAAGCTAGTTGGTGGAAACAACTTGTAACGCTGACAGCAAGATCATTTGTGAACATGAGCAGAGATGTGGGTTACTACTGGTTAAGGATTATAATATATATCATAGTATCTATATGTGTCGGAACTATATACTTTGATATTGGGTATAGCTACACTTCAATCCTGGCTCGTGGGGCATGCGGTGCATTTATATCTGGTTTTATGACATTTATGTCAATTGGAGGTTTCCCATCATTCATTGAAGAAATGAAGGTTTTCTATCGGGAAAGACATAATGGATATTATGGAGTTTTAGTATATATTCTATCCAATTTCCTTTCTTCTTTCCCATTCCTGGTTGCAGTTGCTCTTACTACTGGCACCATTACTTTTAACATGGTGAAATTCCGGCCTGGCTTTATTCACTTTTTGTTCTTCACTCTCAACATCTTTGGTTGCATTGCTGTAATAGAGAGCCTCATGATGGTCGTAGCTTCACTTGTTCCTAATTTCCTCATGGGAATAATTACTGGAGCTGGAATAATTGGAATCATGATGATGACCTCTGGATTCTTCAGGCTGCTGAATGATCTTCCAAAGCCAGTTTGGCGCTATCCCATATCTTATCTTAGTTATGGCGCCTGGGCAATACAGGGTGCCTACAAGAATGACTTGCTAGGGCTTGAGTTTGAGCCTATGTTATCAGGTGACCCAAAACTGAGGGGTGATTATATCATAACGCACATGTTGGGCATGGAACTGAATCATTCCAAGTGGTGGGACTTGGGAGCTCTATTTATCATTCTTGTAGGTTACAGAATTCTTTTCTTTATTGTTCTCAAGTTCAAGGAGAGAGCTTCCCCATTATTTCAGAGACTCCATGCGAAGAGAACAATACAAGCACTTGAAAAGAGACCTTCTTTCAGGAAAATGCCAAGTTTTCCTTCAAAGAGACACCAGCCCCTCCATTCACTGTCTTCTCAAGAAGGTCTTAATTCTCCACTCAACTAG 2082 0.4179 MEIEDSSGGRRHNGSGFSAFTPAAVYGALDRGSCLVWEDLTVVIPNFGKGPTKRLLNGLHGYAEPGRIMAIMGPSGSGKSTLLDSLAGRLSKNVVMTGNIMLNGKKKRLDYGAVAYVTQEDVLLGTLTVRETISYSAHLRLPTTMNKEEINGIVDGTIIEMGLQDCADRLIGNWHLRGISGGEKKRLSIALEILTRPRLLFLDEPTSGLDSASAFFVVQTLRTVARDGRTVISSIHQPSSEVFALFDDLFLLSGGETVYFGEAKMAVEFFAEAGFPCPRKRNPSDHFLRCINSDFDIVTATLKGSQRIRDIPNSSDPFMNMATAEIKAMLVEKYRRSVYARTTKEKIQELSNIEGIEAETQSGSQASWWKQLVTLTARSFVNMSRDVGYYWLRIIIYIIVSICVGTIYFDIGYSYTSILARGACGAFISGFMTFMSIGGFPSFIEEMKVFYRERHNGYYGVLVYILSNFLSSFPFLVAVALTTGTITFNMVKFRPGFIHFLFFTLNIFGCIAVIESLMMVVASLVPNFLMGIITGAGIIGIMMMTSGFFRLLNDLPKPVWRYPISYLSYGAWAIQGAYKNDLLGLEFEPMLSGDPKLRGDYIITHMLGMELNHSKWWDLGALFIILVGYRILFFIVLKFKERASPLFQRLHAKRTIQALEKRPSFRKMPSFPSKRHQPLHSLSSQEGLNSPLN 693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1767 693 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 35 268 IPR027417 -
Lele28g1767 693 ProSitePatterns ABC transporters family signature. 179 193 IPR017871 GO:0005524|GO:0016887
Lele28g1767 693 Gene3D - 30 274 IPR027417 -
Lele28g1767 693 MobiDBLite consensus disorder prediction 666 693 - -
Lele28g1767 693 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 35 279 IPR003439 GO:0005524
Lele28g1767 693 Pfam ABC transporter 57 207 IPR003439 GO:0005524
Lele28g1767 693 SMART AAA_5 65 236 IPR003593 -
Lele28g1767 693 Pfam ABC-2 type transporter 236 363 IPR043926 GO:0140359
Lele28g1767 693 CDD ABCG_EPDR 35 261 - -
Lele28g1767 693 FunFam ABC transporter G family member 11 29 273 - -
Lele28g1767 693 Pfam ABC-2 type transporter 371 580 IPR013525 GO:0016020|GO:0140359
Lele28g1767 693 MobiDBLite consensus disorder prediction 676 693 - -
Lele28g1767 693 PANTHER ABC TRANSPORTER G FAMILY MEMBER 11 30 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1767 Lele-ChrLele28 20576953 20583627 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1767 51 248 Calmodulin-binding Proteins AT2G36910 30.622 3.51e-12 68.2