Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1747 ATGGTTAATGATCTGTGTTGGGCTGTTATGGCTACTGCACCAGATGCTGGTCAACTGATTTCCATGCTTCTGCAGCTAGTCAAAGCGAAAAAGACTATTGAAGTTGGAGTCTTCACTGGATACTCCCTTTTGCTACTGCTCTTTCAATTCCAGAGGATGGAAAGGTTATCTGGATTTTCACTGGTATTGCTTAAGCATGCCAATGAAGGGAATTTTGACTTTGCATTTATCGATGCTGACAAAGTTAATTGCTGGAATTACCATGAAAGACTAATGAAATTGGTGAAGGTTGGTGGCATAGTTGTTTATGACAACACACTCGGGGGAGGATCGGTAGCAATGAGTGATGAGGACACTCCAGAATTTAGAAAACAAGGAAGGCAACTGACAATTGAATTTAACAGATTAATCGCGGCCGATCCTCGTATTCATGTTTCACTTCCTCCGTTTGGTGATGGCATCACCATTTGCAAGCGCATCTATTAA 486 0.4177 MVNDLCWAVMATAPDAGQLISMLLQLVKAKKTIEVGVFTGYSLLLLLFQFQRMERLSGFSLVLLKHANEGNFDFAFIDADKVNCWNYHERLMKLVKVGGIVVYDNTLGGGSVAMSDEDTPEFRKQGRQLTIEFNRLIAADPRIHVSLPPFGDGITICKRIY 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1747 161 Gene3D Vaccinia Virus protein VP39 56 161 IPR029063 -
Lele28g1747 161 Gene3D Vaccinia Virus protein VP39 3 55 IPR029063 -
Lele28g1747 161 Pfam O-methyltransferase 65 160 IPR002935 GO:0008171
Lele28g1747 161 Pfam O-methyltransferase 6 47 IPR002935 GO:0008171
Lele28g1747 161 ProSiteProfiles SAM-dependent O-methyltransferase class I-type profile. 1 160 IPR002935 GO:0008171
Lele28g1747 161 PANTHER O-METHYLTRANSFERASE-RELATED 8 46 - -
Lele28g1747 161 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 4 159 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1747 Lele-ChrLele28 20378194 20379444 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1747 8 161 Monolignol Biosynthesis Gene Families AT4G26220 50.000 1.43e-59 183