LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele28g1718	ATGGCTAAAGATCAATTGAACGTTCTTCAAGCTCTTGATGCAGCCAAAACACAATGGTACCACTTTACGACGATTGTGATCGCCGGGATGGGTTTCTTCACCGATTCTTACGATCTTTTCTGCATTTCTATGGTCACAAAATTACTCGGTCGTATATATTACTACAAAGAAGGCTCTCTTGAACCCGGTTCTCTTCCAGCCAACGTCTCCGCCGCCATAACCGGCGTCGCCTTCTGCGGAACCCTAATCGGCCAACTCTTCTTCGGGTGGCTTGGAGACAGGCTCGGAAGAAAACGCGTCTATGGTATAACACTAATGCTCATGGTGATTTGTTCTATCGGTTCTGGTCTCTCTCTTGGATCGAACCCTAAAGCTGTTATGTCTACTCTTTGTTTCTTCCGATTCTGGCTTGGCTTTGGCATTGGCGGCGACTACCCTCTTTCCGCCACTATCATGTCGGAGTATTCCAATAAGAAGACTCGTGGGGCTTTCATCGCTGCTGTTTTCGGAATGCAAGGGTTTGGGATTCTTGCCGGTGGCACCGTGGCAATCATCATCTCTTCAATTTTCAAAGCTCACTTTCCGGCACCGTCGTATCAGACGAATCCAGTTTTATCTACAGTTTCTGAAGCCGATTATGTCTGGAGATTCATTCTCATGTTCGGTGCTGTACCGGCAATTTTAACTTATTATTGGCGTATGAAGATGCCTGAAACTGCTCGTTACACCGCCTTGGTCGCTAAGAACACGAAGCAAGCAGCTTCCGATATGTCCAAAGTTCTTCAAGTTGAGATACAAGCAGAAAGTGATGATCAGAAAGTTTCTGATAATAACCAATTTGGGTTATTCTCGAAGCAGTTTCTTCATCGTCATGGGCTTCACTTGCTTGGGACAATGACGACGTGGTTTTTTCTGGATATTGCGTTTTACAGTCAGAATCTATTTCAGAAAGATATATTCACTTCCATTGGGTGGATTGCTGATGCGAAGACGATGAGCGCCATTGAAGAGGTGTTCAAGATCGCCAGAGCTCAGACCTTGATAGCCATTTGCAGCACTGTGCCAGGTTACTGGGTCACGGTAGCTCTGATTGATCGGATCGGAAGGTTCTCGATTCAGATCATCGGCTTCACTTTCATGACGGTGTTCATGTTTGCTCTGGCCATTCCTTACGAGCACTGGACCATGAACGGAAACCAGATATGGTTCGTGGTGATGTACTCGTTAACCTTCTTCTTCTGCAACTTTGGGCCCAACTCTACGACATTCATTGTCCCGGCGGAGATATTTCCAGCGAGGCTGAGGTCTACGTGCCATGGAATATCGGCGGCAGCAGGTAAAGCCGGAGCAATAGTGGGATCATTTGGGTTTCTGTATGCTTCAAACACTATTGGAGTGAGGAATGCTTTGATACTTTTGGCTGTGATTAACTTGTTGGGTTTGATGTTTACCTTTCTTGTGCCGGAGACGAAGGGAAAATCATTAGAGGAGATTTCCGGCGAAGGTGAGGGAGAAGAAGAAGAAGAGACTAGTGATAATGTTCCAAGAGACCATAGGATTGAAAATATGGCTTAA	1575	0.4597	MAKDQLNVLQALDAAKTQWYHFTTIVIAGMGFFTDSYDLFCISMVTKLLGRIYYYKEGSLEPGSLPANVSAAITGVAFCGTLIGQLFFGWLGDRLGRKRVYGITLMLMVICSIGSGLSLGSNPKAVMSTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFGMQGFGILAGGTVAIIISSIFKAHFPAPSYQTNPVLSTVSEADYVWRFILMFGAVPAILTYYWRMKMPETARYTALVAKNTKQAASDMSKVLQVEIQAESDDQKVSDNNQFGLFSKQFLHRHGLHLLGTMTTWFFLDIAFYSQNLFQKDIFTSIGWIADAKTMSAIEEVFKIARAQTLIAICSTVPGYWVTVALIDRIGRFSIQIIGFTFMTVFMFALAIPYEHWTMNGNQIWFVVMYSLTFFFCNFGPNSTTFIVPAEIFPARLRSTCHGISAAAGKAGAIVGSFGFLYASNTIGVRNALILLAVINLLGLMFTFLVPETKGKSLEEISGEGEGEEEEETSDNVPRDHRIENMA	524

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele28g1718	524	Gene3D	MFS general substrate transporter like domains	20	516	IPR036259	-
	Lele28g1718	524	ProSiteProfiles	Major facilitator superfamily (MFS) profile.	24	492	IPR020846	GO:0022857
	Lele28g1718	524	MobiDBLite	consensus disorder prediction	496	524	-	-
	Lele28g1718	524	Pfam	Sugar (and other) transporter	26	499	IPR005828	GO:0016020\|GO:0022857\|GO:0055085
	Lele28g1718	524	PANTHER	SOLUTE CARRIER FAMILY 22 MEMBER	19	496	-	-
	Lele28g1718	524	CDD	MFS_PhT	25	491	-	-
	Lele28g1718	524	FunFam	Inorganic phosphate transporter 1-6	20	514	-	-
	Lele28g1718	524	TIGRFAM	2A0109: phosphate:H+ symporter	11	501	IPR004738	GO:0005315\|GO:0006817\|GO:0016020
	Lele28g1718	524	SUPERFAMILY	MFS general substrate transporter	11	503	IPR036259	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele28g1718	Lele-ChrLele28	20066478	20068052	Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele28g1718	1	507	Inorganic Solute Cotransporters	AT3G54700	74.423	0.0	810