Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1693 ATGCGTGTGCTACACAGAATATTTCCTCGACCATCACATCGTGTTGTGATCTTTCCTTATTACCGCTTCTTTCTCCGTTCTCTCTTCTATCTTCTCCGGCCTTTTTGCTCTTCTTCCCTTCACTTCTCCCCCCCCCCTCTCTCTCTCTTCATCACAATGTGTGGAATACTCGCTGTGCTTGGTTGTACCGACGACTCTCAGGCCAAGAGAGTCCGCGTCCTCGAACTCTCTCGAAGATTGAGGCATCGTGGTCCTGATTGGAGTGGTCTCCACCAACATGGTGATTGTTACTTGGCTCATCAACGGCTGGCCATTATTGATCCTGCTTCTGGTGATCAACCTCTCTTTAATGAGGACAAATCTGTCGTCGTCACGGTGAATGGAGAGATATACAACCATGAAGAGCTGAGGAAACAACTGTCCAACCACAAGTTCAGGACAGAAAGTGACTGTGATGTTATTGCACATTTGTATGAGGAATATGGAGAGAATTTTGTGGACATGCTGGACGGCATCTTTTCGTTTGTTCTTCTGGACACCCGAGACAACAGCTTCATTGTTGCAAGAGATGCTATTGGTGTCACCTCTCTTTACATTGGCTGGGGACTAGATGGGTCTGTTTGGATTTCATCTGAGCTCAAAGGGCTCAATGATGATTGTGAGCATTTCGAGTGTTTCCCTCCTGGCCACTTGTACTCGAGCAAAGAAGGAGGCTTCCGTAGGTGGTACAATCCTCCATGGTTCTCTGAGGCTGTTCCATCAATCCCTTATGATCCCTTAGCTCTGAGGCATGCTTTTGAGAAGGCAGTCATAAAAAGGCTTATGACAGATGTGCCTTTCGGTGTTTTACTGTCTGGAGGTTTGGACTCATCCTTGGTTGCATCCATCACCGCTCGTTACCTCGCTGATACGAAAGCCGCCAAACAGTGGGGACCAAAACTACACTCCTTCTGTGTAGGCCTTGAGGGCTCACCAGATCTGAAGGCTGCAAAAGAAGTTGCAGACTACATAGGGACTGTTCACCATGAATTTCACTTCACTGTCCAGGATGGCATAGATGCCATTGAAGATGTAATCTATCATATAGAAACATATGATGTGACTACAATCAGAGCTAGTACCCCTATGTTCCTCATGTCACGCAAGATTAAATCGCTCGGAGTGAAAATGGTTATCTCTGGAGAGGGATCCGATGAAATTTTTGGCGGGTATCTGTACTTCCACAAGGCCCCTAACAAGAAGGAGTTCCATGAAGAGACTTGCCGCAAGATTAAGGCACTTCATCAGTATGATTGCTTGAGAGCCAATAAGGCAACATCTGCTTGGGGCCTGGAAGCTAGAGTCCCATTCCTGGACAAGGAGTTTATCAACGTTGCAATGAACATTGATCCTGAGTATAAAATGATAAAACGCGATGAAGGCCGGATTGAGAAGTGGGTCCTAAGGAGAGCCTTTGATGATGAGGAGCATCCTTATCTTCCAAAGCACATTTTATACAGACAGAAAGAACAATTCAGTGATGGGGTCGGTTATAGTTGGATTGATGGCCTTAAAGCCCATGCTGCAAAACATGTGAGTGACAAAATGATGCTCAATGCTGCTAACATCTTCCCCCACAACACTCCAACCACCAAAGAGGCATATTATTATAGAATGATCTTTGAGAGGTTCTTCCCTCAGAACTCTGCAAGGCTTACTGTTCCTGGAGGCGCGAGTGTGGCTTGCAGCACGGCGAAAGCAGTGGAGTGGGACACAGCCTGGTCGAACAATCTGGATCCTTCTGGTAGAGCAGCACTTGGAGTGCATGTTTCAGCTTATGACGACCAAAACAAAGCTGTAGAGCCAGAGAAGATCATACCCAAGATGGAAATGCCTTTTGGAGTAGCAATCCAGAGCTAA 1899 0.465 MRVLHRIFPRPSHRVVIFPYYRFFLRSLFYLLRPFCSSSLHFSPPPLSLFITMCGILAVLGCTDDSQAKRVRVLELSRRLRHRGPDWSGLHQHGDCYLAHQRLAIIDPASGDQPLFNEDKSVVVTVNGEIYNHEELRKQLSNHKFRTESDCDVIAHLYEEYGENFVDMLDGIFSFVLLDTRDNSFIVARDAIGVTSLYIGWGLDGSVWISSELKGLNDDCEHFECFPPGHLYSSKEGGFRRWYNPPWFSEAVPSIPYDPLALRHAFEKAVIKRLMTDVPFGVLLSGGLDSSLVASITARYLADTKAAKQWGPKLHSFCVGLEGSPDLKAAKEVADYIGTVHHEFHFTVQDGIDAIEDVIYHIETYDVTTIRASTPMFLMSRKIKSLGVKMVISGEGSDEIFGGYLYFHKAPNKKEFHEETCRKIKALHQYDCLRANKATSAWGLEARVPFLDKEFINVAMNIDPEYKMIKRDEGRIEKWVLRRAFDDEEHPYLPKHILYRQKEQFSDGVGYSWIDGLKAHAAKHVSDKMMLNAANIFPHNTPTTKEAYYYRMIFERFFPQNSARLTVPGGASVACSTAKAVEWDTAWSNNLDPSGRAALGVHVSAYDDQNKAVEPEKIIPKMEMPFGVAIQS 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1693 632 Pfam Asparagine synthase 262 413 IPR001962 GO:0004066|GO:0006529
Lele28g1693 632 CDD AsnB 54 244 IPR033738 -
Lele28g1693 632 Gene3D HUPs 249 565 IPR014729 -
Lele28g1693 632 FunFam Asparagine synthetase [glutamine-hydrolyzing] 54 244 - -
Lele28g1693 632 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 52 247 IPR029055 -
Lele28g1693 632 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 54 237 IPR017932 -
Lele28g1693 632 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 54 244 IPR029055 -
Lele28g1693 632 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 251 531 - -
Lele28g1693 632 FunFam Asparagine synthetase [glutamine-hydrolyzing] 247 566 - -
Lele28g1693 632 Pfam Glutamine amidotransferase domain 100 217 IPR017932 -
Lele28g1693 632 PANTHER ASPARAGINE SYNTHETASE 53 606 - -
Lele28g1693 632 CDD Asn_Synthase_B_C 263 508 IPR001962 GO:0004066|GO:0006529
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1693 Lele-ChrLele28 19864495 19868976 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele01g1219 01 7353530 7358347 Lele28g1693 28 19864495 19868976 CCT
Lele02g1489 02 19089372 19094181 Lele28g1693 28 19864495 19868976 CCT
Lele03g1232 03 7316094 7320925 Lele28g1693 28 19864495 19868976 CCT
Lele04g1474 04 19938523 19943327 Lele28g1693 28 19864495 19868976 CCT
Lele25g1689 25 24569210 24573396 Lele28g1693 28 19864495 19868976 hybridization
Lele26g1689 26 20424285 20428780 Lele28g1693 28 19864495 19868976 hybridization