Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1690 ATGTCGTGCTCCGTCGCCCTCTCCAACTCTCCGGTCTTCTCTCCGTCGTCTTCTCTCTTCTGCAACAAGCCCTCCGTCTTCATCTCTTCCTCGCCGGAATCCCTTTCTCTCTCTTTGTCCCATCTCAAGCCTTCCGCTTCTGCTTCATCTTCTTCGCCTTCTTCACCTTCCTCGCCTTTCCGCCTTCGCCTCCTCAAGCCTCCTCCTCCTACCGCCTTTCCCAACTCCGCCTCCGCTCCTTCCTCCTCCACCTCGCCTAACGGTACCGTTTTGAAGAGGAAGAGGCCCGCTAGGATTGATATTCCCGTGGTCTCGTCTCTCACTTTTGGGGTTCCGGCGACGCCGTCTGCTTCGGTACCTCGAGATGTTCTAGAGGCCGAAGGGCTTGGGTTTTCTGTTTATTGTAAGAGAGGCAGGCGAGAGTACATGGAAGATCGTTATTCTGCTGCCGTCAATCTTCAAGGACAACCCAAACAGGCTTTCTTTGGCATATTTGATGGGCACGGAGGTTCAAAAGCTGCTGAATTTGCTGCACATAACTTAGAAAAGAACGTCATGGATGAAGTAACAAATAGAGATGAAGATGACATAGAGGAGGCAGTGAAACATGGTTACCTGAATACTGATTCTGATTTCTTAAAAGAGGATCTTCATGGTGGCTCCTGCTGTGTAACAGCACTGATTAAGAACGGAAACCTCGTTGTTTCTAACGCCGGCGATTGCCGTGCTGTTATTAGCCGAGGTGGAGTTGCAGAAGCCCTCACATCTGATCACAGACCTTCAAGGGAAGATGAAAGAGACAGAATTGAGACCACAGGTGGCTATGTTGATTTATGCCGTGGGATTTGGAGGATCCAAGGATCTCTAGCAGTTTCTAGAGGAATTGGAGATAGGTATTTGAAGCGATGGGTTATAGCTGAACCTGAGACTAAAGTTCTCAGAATTGAACCTGAACATGACTTGTTGATCTTAGCTTCAGATGGATTATGGGATAAGGTTACTAATCAAGAAGCTGTGGATATTGCTCGTCCTCTTTGCAATGGGGGTGGTAGTAGTAATATAGCAAAACCATTGATGGCCTGTAAAAAGCTTGTAGATTTGTCTGTCTCAAGAGGCTCAAGTGATGACATAAGCGTTATGCTAGTAAAACTGGGACACTTAATGTAA 1167 0.4756 MSCSVALSNSPVFSPSSSLFCNKPSVFISSSPESLSLSLSHLKPSASASSSSPSSPSSPFRLRLLKPPPPTAFPNSASAPSSSTSPNGTVLKRKRPARIDIPVVSSLTFGVPATPSASVPRDVLEAEGLGFSVYCKRGRREYMEDRYSAAVNLQGQPKQAFFGIFDGHGGSKAAEFAAHNLEKNVMDEVTNRDEDDIEEAVKHGYLNTDSDFLKEDLHGGSCCVTALIKNGNLVVSNAGDCRAVISRGGVAEALTSDHRPSREDERDRIETTGGYVDLCRGIWRIQGSLAVSRGIGDRYLKRWVIAEPETKVLRIEPEHDLLILASDGLWDKVTNQEAVDIARPLCNGGGSSNIAKPLMACKKLVDLSVSRGSSDDISVMLVKLGHLM 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1690 388 MobiDBLite consensus disorder prediction 42 94 - -
Lele28g1690 388 SUPERFAMILY PP2C-like 127 385 IPR036457 -
Lele28g1690 388 FunFam probable protein phosphatase 2C 25 123 387 - -
Lele28g1690 388 ProSiteProfiles PPM-type phosphatase domain profile. 130 384 IPR001932 -
Lele28g1690 388 CDD PP2Cc 130 384 IPR001932 -
Lele28g1690 388 Pfam Protein phosphatase 2C 131 377 IPR001932 -
Lele28g1690 388 PANTHER PROTEIN PHOSPHATASE 2C 70 383 IPR015655 GO:0004722|GO:0006470
Lele28g1690 388 MobiDBLite consensus disorder prediction 76 90 - -
Lele28g1690 388 ProSitePatterns PPM-type phosphatase domain signature. 161 169 IPR000222 GO:0043169
Lele28g1690 388 SMART PP2C_4 120 382 IPR001932 -
Lele28g1690 388 MobiDBLite consensus disorder prediction 42 59 - -
Lele28g1690 388 Gene3D - 128 387 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1690 Lele-ChrLele28 19821376 19823146 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1690 1 388 PP2C-type Phosphatase Gene Family AT2G30020 65.271 2.66e-170 479