Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1688 ATGGTGACCACGATGAGCTCTCTGCGTTATTCTGATTCTTCAATGGCTTCTTCTTCTTGGGTTCGAGGTCCGTGTTTAGGGAAGGGCTCGTTTGGTACGGTGACTATTGGAGTGAGTAAATCCGACGGTCGGGTTTTTGCGGTGAAGTCCGTGGATCTTCAGTCGGGTCAAGTGGCGGCGTTAGAGAATGAGATTCGGATCCTTCGGTGTATGTCTTCACCGTACGTGGTGACCGTCCTCGGCGATGATGCTACGACGTCGTATCGGAACTTGTATTTGGAGTACCTGCCAGGTGGCACCCTGGCTGACCTAGCGTCTCTGAAGAAGAATGGCGGGAGATATGCTGACGTGGATGAGCGTGTGGTGAGGTACTTCACCTGGTGTGTTGTGAACGCTCTGAGGTACGTTCACGCGAGGGGAGTTGTTCACTGTGATGTTAAAGGGAAGAACATTCTGGTTGGGCTTAATGGCGGCGTGGCTAAGCTCGCCGACTTTGGTTCGGCGGTGGAGCAGAGCTCCTCCGGGCCGGTAGCGGTGCGGATATTGCCACGTGGAAGCCCGCTATGGATGGCGCCAGAGGTGATTCGGCAGGAGTCTCAGGGTCCGGAATCCGACGTGTGGTCCTTAGGATGTACGGTGATAGAGATGGTCACTGGTAAGACAGGCTGGGACAACGACGATGGATTTAACACGCTCAGTCGAATAGGATACTCCGACGACTTGCCAGTGTTTCCAAGTCAATTGTCAGAACTCGGACGCGACTTCCTCGGCAGGTGCCTGAGGAGAGAACCAAGCGAGCGGTGGAGCTGTGATCAGCTGCTGCAGCATCCATTTCTGCTTCCTACGCCTCCGAATAAGCTCACAGAATCGTCTCCTCGGTGCATCCTCGATTGGATAAACTCAAACGAATTCAAGGAAGAAGAAGAAGAAGAAGGAATCAGAATCAACAATGAAAACTCAGCGAGTGAGAGAATCAGTAAATTAGCTTCAAAATCAAGGGCAAATTGGGAATTCGAAAATGATTGGTTGGAGGTGAGGACATTGGCGTCCAACACAGAATCAATAGTAGCAGTTACTGGTAGCGGGAGGGAAGACGAAGATGAAGAAGGGACCAGTTCAGAATATGCTGATTGGGGGACGGTAGATGGGGGAATAAAAGAGTTGGGGCTAAGTTGGGAATATTTCAAAAAGGGAAGGGGTAATCTGGGGATATGGAGTTGGGTAGAGGATCAAAGTGAAAATGATTGGAGATTTGAGTATGGGCTGCACAAGACGGATCTGTTGAGAAAGATAAGATCAATAGCAAACATTTACAGCTTGTGGTGTTCTTGTTGTGAATTGAGGCCACTACTTGGCGATGAGATATCATCAGAATTCGCAGGTAACATGCTACACATCAACCGTGCCTCTCGCTTTGTGTCTCCAAAATAA 1431 0.4997 MVTTMSSLRYSDSSMASSSWVRGPCLGKGSFGTVTIGVSKSDGRVFAVKSVDLQSGQVAALENEIRILRCMSSPYVVTVLGDDATTSYRNLYLEYLPGGTLADLASLKKNGGRYADVDERVVRYFTWCVVNALRYVHARGVVHCDVKGKNILVGLNGGVAKLADFGSAVEQSSSGPVAVRILPRGSPLWMAPEVIRQESQGPESDVWSLGCTVIEMVTGKTGWDNDDGFNTLSRIGYSDDLPVFPSQLSELGRDFLGRCLRREPSERWSCDQLLQHPFLLPTPPNKLTESSPRCILDWINSNEFKEEEEEEGIRINNENSASERISKLASKSRANWEFENDWLEVRTLASNTESIVAVTGSGREDEDEEGTSSEYADWGTVDGGIKELGLSWEYFKKGRGNLGIWSWVEDQSENDWRFEYGLHKTDLLRKIRSIANIYSLWCSCCELRPLLGDEISSEFAGNMLHINRASRFVSPK 476
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1688 476 SUPERFAMILY Protein kinase-like (PK-like) 9 301 IPR011009 -
Lele28g1688 476 Pfam Protein kinase domain 25 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1688 476 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Lele28g1688 476 FunFam Serine threonine protein kinase putative 18 329 - -
Lele28g1688 476 Gene3D Transferase(Phosphotransferase) domain 1 14 351 - -
Lele28g1688 476 SMART serkin_6 20 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1688 476 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 15 363 - -
Lele28g1688 476 CDD STKc_MAPKKK 20 279 - -
Lele28g1688 476 ProSitePatterns Serine/Threonine protein kinases active-site signature. 141 153 IPR008271 GO:0004672|GO:0006468
Lele28g1688 476 ProSiteProfiles Protein kinase domain profile. 20 279 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1688 Lele-ChrLele28 19795934 19798735 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1688 14 391 MAP Kinase Kinase Kinase AT1G07150 53.230 7.69e-118 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lele28g1688 Pkinase 2e-54 CL0016