Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1685 ATGGCTGTTTGCGTGACCGATACGGCTCGAGCCGCCGCTTGTAGAAATGGTGAAGCGGCGGCTCACCTGAAAGTGATCTCGATCTTCGTGATTTTCTTTACCAGTATGTTCGGCATGTCGTTGCCGGTGCTATTAGCGCGATATTTCCAAGGGAAATCGCTCTACGATAAGGCAATCGTAGTGATTAAGTGCTTCGCCGCCGGTGTCATCCTCTCCACCTCCCTCGTCCATGTTCTCCCCGACGCGTACGCCGCACTCTCCGATTGCCAGGTCGCTTCAATGCATCCATGGAAGGATTTCCCCTTCGCCGGCCTGGTCACGCTAATTGGCGCTCTGATGGCTCTGTTCGTTGACATCGCGGCGAGCTCGCACGTTGAGCACTCGCACTCGCACGCGCACGCGCAGACTCAGTACGCGCTGGTTGGAGCACAGGAGAAGCTGGAATCGGGCGAGTCGAAGACCGAGTTGGGGATTACGAGTTTCGAGAGGGAACGACAAGCGGCGGAGGAAATGGCGAAATTGAAGCAGAGATTGGTGTCTCAGGTACTGGAAATCGGAATAATCTTTCATTCTGTGATAATCGGAGTGACGATGGGAATGTCTCAGAACGTTTGCACGATTAGGCCTCTCGTCGCCGCTTTGGCATTTCATCAAATCTTCGAAGGAATGGGTCTCGGCGGTTGCGTAGCGCAGGCGGGATTTAGCCTTGGAACCACGGGTTATATGTGCTTCATGTTCTCGGTTACGACACCGATGGGGATTATATTGGGGATGATATTATTTTCATTGACAGGTTATGATGATAGTAATCCAAAAGCTTTGATCATGGAAGGCTTGTTAGGTTCAATTTCATCAGGGATTTTGATATACATGGCTCTGGTTGACCTAATTGCAGTAGATTTCTTTCACAGCAAGCTCATGAGCTCAAATCTGACATTGAAGAAGGTTTCTTTTGTTGCCTTGACTCTTGGCTCTGCTGCCATGTCAATTCTAGCCCTTTGGGCTTGA 1008 0.506 MAVCVTDTARAAACRNGEAAAHLKVISIFVIFFTSMFGMSLPVLLARYFQGKSLYDKAIVVIKCFAAGVILSTSLVHVLPDAYAALSDCQVASMHPWKDFPFAGLVTLIGALMALFVDIAASSHVEHSHSHAHAQTQYALVGAQEKLESGESKTELGITSFERERQAAEEMAKLKQRLVSQVLEIGIIFHSVIIGVTMGMSQNVCTIRPLVAALAFHQIFEGMGLGGCVAQAGFSLGTTGYMCFMFSVTTPMGIILGMILFSLTGYDDSNPKALIMEGLLGSISSGILIYMALVDLIAVDFFHSKLMSSNLTLKKVSFVALTLGSAAMSILALWA 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1685 335 Pfam ZIP Zinc transporter 22 332 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Lele28g1685 335 PANTHER ZINC/IRON TRANSPORTER 20 329 - -
Lele28g1685 335 TIGRFAM zip: ZIP zinc/iron transport family 10 335 IPR004698 GO:0005385|GO:0016020|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1685 Lele-ChrLele28 19761873 19763907 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1685 1 335 Inorganic Solute Cotransporters AT2G30080 67.151 4.53e-162 454
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele25g1683 25 24467630 24469543 Lele28g1685 28 19761873 19763907 hybridization
Lele26g1683 26 20309097 20311094 Lele28g1685 28 19761873 19763907 hybridization