Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1678 ATGTCGAAGGTGGTGTGCGTCACCGGCGGCAGCGGCTGCATTGGCTCATGGCTCGTTCATCTCCTTCTCGAACGTGGCTACACCGTTCACGCCACCGTCAAAGATCTCAATGATGCTTCTGAAACCAAACACCTGCAAGGCTTTGAAGGCGCTGACACTCGCGTCCGTCTCTTCCAGATCGACCTCCTCGATTACAATTCCATCGTCGCAGCCGTCGCTGGCTGCACCGGCGTTTTCCATCTCGCTTCTCCCTGCATCGTCGACCGAGTCCAAGATCCTCAGAAAGAGCTTTTGGACCCGGCGATTAAAGGTACAATCAATGTGCTCACGGCGGCTAAGGAAGCCGGGGTGAGCCGTGTCGTGATAACTTCATCGATCTCTTCCATTACTCCGAGCCCTAAATGGCCATCTGATGTTATTAAGAATGAAGATTGCTGGACCGATATCGAATACTGCAAGGAAAACCAATTATGGTATCCGATGTCAAAATCATTGGCTGAGAAATCTGCTTGGGAATTTGCTAAGGAGAAAGGTTTGGATATTGTGGTGGTGAATCCTGGCACTGTCATGGGTCCTGTGATTTCTCCAAAACTTAATGCAAGCATGATAATGCTTGTACGTCTACTTCAAGGCTGCACTGAAACGTATGAGGACTTCTTTATGGGATCAGTCCACTTTAAAGATGTAGCCTTAGCTCATATTTTGGTGTATGAGAACAAATCAGCATCTGGTAGGCATTTGTGCGTTGAAGCTATCTCTCACTATGGTGACTTTGTAGCAAAGGTAGCTGAACTTTATCCAGAGTATAATGTGCCTCGTTTGCCTCGAGATACCCAACCAGGATTGTTGAGAGCAAAAGATGCATCCAAGAAACTAATGGGTTTGGGTTTGAAATTCATTCCAATGGAGCAAATTATCAAGGAAGCTGTGGAGGACCTGAAGAGCAAGGGTTTCATTTGA 960 0.4719 MSKVVCVTGGSGCIGSWLVHLLLERGYTVHATVKDLNDASETKHLQGFEGADTRVRLFQIDLLDYNSIVAAVAGCTGVFHLASPCIVDRVQDPQKELLDPAIKGTINVLTAAKEAGVSRVVITSSISSITPSPKWPSDVIKNEDCWTDIEYCKENQLWYPMSKSLAEKSAWEFAKEKGLDIVVVNPGTVMGPVISPKLNASMIMLVRLLQGCTETYEDFFMGSVHFKDVALAHILVYENKSASGRHLCVEAISHYGDFVAKVAELYPEYNVPRLPRDTQPGLLRAKDASKKLMGLGLKFIPMEQIIKEAVEDLKSKGFI 319
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1678 319 CDD FR_SDR_e 5 297 - -
Lele28g1678 319 FunFam Cinnamoyl-CoA reductase 1 1 319 - -
Lele28g1678 319 Pfam NAD dependent epimerase/dehydratase family 5 241 IPR001509 -
Lele28g1678 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 313 IPR036291 -
Lele28g1678 319 Gene3D - 1 319 - -
Lele28g1678 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 310 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele28g1678 Lele-ChrLele28 19443630 19446962 Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1678 3 319 Monolignol Biosynthesis Gene Families AT5G58490 78.549 0.0 535