Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1672 ATGGCGGCGCTATCTCTGTTTTCGGTGGCCACAAAACAGAGCCTCGCTCTGTCTCTGAACACCCAAGGTTTGGCTCTGCTACGGTTCAGAGACAGAGTCGTGACTGACCCATTTGGAGCTTTATCGAATTGGAATGCTAAAGATGGATTCATTGATCCGTGTTCTTGGTTTGGAGTTGAGTGTTTGGAAGGCAAAATCGTTTCCTTAATTCTACGCAATAATTCTTTCTTTGGGGAAATACCTAATGAGATTACACAATTAGAGAAACTTGAAGTACTAGATTTGGGATATAACAACTTAAGTGGATCATTTCCATTTGAAACCAATGCTTCATGGACTAGCCTTTTCTTGGACCACAATGATCATCTTGTAGCTAACTTGACTTCAGAAATATTTGAGCTCAAGATGATTTCTGAATCTCATGTAAATGAAGACCTGTCAAAAGCGGCATGTGTAAACAGATCTAGTCTGAGGTACAAGAGGCAACTTCTTCAAATATCAAATCCTCCTACTTCATTACCACCAGATACTCAAGTTTTCTCACCATCTGAACCTCCCTCAAATTCTCCATCACCATCATCATTTCCCCCCATTTTTCTCCCTCCCTCACCTGCATCTTCGCGTTCACCTTCGCCTGCAACTTCTTCACCTTCACCTATAATAGCACCAACACCAGAAATATCAACAGCAAACCCACCTTTTGTTGTATCCGATCCACCGCAGTCCAATGGGGTTTCATCTCCTTCTCCTACTCCACTTTCAAACCTAGGGAGTTCTAAGCCAAAGCATCTTTCTATGATAATTTGGTCTACAGTTGGTGGTTTCTCTTTATTGGTTTTGGTGTCAGCTATCGCTTTTTCTTGCTTCGGTAATACTAAGGTTGTAACTGTAAAACCTTGGCCCATAAGCTTGAGCGGGCAGCTACAGAAAGCTTTTGTTACAGGTGTGCCTAGTCTCAAAAGAGCAGAACTTGAAGCAGCATGTGAAGGTTTCAGCAACATTATAGGATATCTTCCTAAGGGTACCATTTATAAGGGAACTCTCTCCAGTGGAGTTGAGATAGCTGTACTATCCAATTCAATAATCTCACCTCTAAACTGGTCAAAACATATGCAAGCCCAATTTAGAAAGAAGTTACAAACATTATCCAGAGTGAACCACAAGAACTTTGTGAATCTGATTGGGTTCTGTGAGGAGAAGCAGCCCGTCACAAGAATGGTGGTTTTTGAATATGCTCCAAATGGAACTCTATATGAACATCTACATGTTAGACAAGCAGAGCAACTTGACTGGGGAATGAGAATGAGAGTAGCAATGGGAATAGCTTACTGTTTGGAGTATATGCATCAGCTAATTCCACCAATCGCTCATCAAAACCTACAATCTTCATCTATATGCCTAACTGAAGATTATGCTGCAAAAATATCAGATCTTAGTTTTTGGAATGAAATTGTTACTTCTATTAAAACGGGTTCTTCTGCAGCCACAAGGCTCTTAGAAACACCATTAGCATATACAAAGGGAAATGTTTATAGCTTTGGGTTAATATTGTTTGAACTAATAACAGGTAAAATTCCCTATACTGAGGACAGTGGAATTCTCACAGATTGGGCAGCTGAATATCTAAGATGGGGGAAGAAGCCCCTCATCGATGCAGGGGACCCCACTCTGAGAACTTTGAAAGAAGAAGAGATTGAGAAGTGGTTCCAAGTTATGAAAGAATGTGTGGATTCAGACCCAGAGAAAAGGCCAAGTATGAGAGAGGTTACTTCTATGTTGAAGGAAATAACAGCAATGGAACCAGATGAAGCTATACCAAAATCATCTCCTCATTGGTGGGAGGAGCTAGAAATTATGTCAGGGGAAATAGAATCCCTAAATTGA 1884 0.4082 MAALSLFSVATKQSLALSLNTQGLALLRFRDRVVTDPFGALSNWNAKDGFIDPCSWFGVECLEGKIVSLILRNNSFFGEIPNEITQLEKLEVLDLGYNNLSGSFPFETNASWTSLFLDHNDHLVANLTSEIFELKMISESHVNEDLSKAACVNRSSLRYKRQLLQISNPPTSLPPDTQVFSPSEPPSNSPSPSSFPPIFLPPSPASSRSPSPATSSPSPIIAPTPEISTANPPFVVSDPPQSNGVSSPSPTPLSNLGSSKPKHLSMIIWSTVGGFSLLVLVSAIAFSCFGNTKVVTVKPWPISLSGQLQKAFVTGVPSLKRAELEAACEGFSNIIGYLPKGTIYKGTLSSGVEIAVLSNSIISPLNWSKHMQAQFRKKLQTLSRVNHKNFVNLIGFCEEKQPVTRMVVFEYAPNGTLYEHLHVRQAEQLDWGMRMRVAMGIAYCLEYMHQLIPPIAHQNLQSSSICLTEDYAAKISDLSFWNEIVTSIKTGSSAATRLLETPLAYTKGNVYSFGLILFELITGKIPYTEDSGILTDWAAEYLRWGKKPLIDAGDPTLRTLKEEEIEKWFQVMKECVDSDPEKRPSMREVTSMLKEITAMEPDEAIPKSSPHWWEELEIMSGEIESLN 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1672 627 SUPERFAMILY Protein kinase-like (PK-like) 331 612 IPR011009 -
Lele28g1672 627 MobiDBLite consensus disorder prediction 166 257 - -
Lele28g1672 627 Gene3D Transferase(Phosphotransferase) domain 1 412 608 - -
Lele28g1672 627 MobiDBLite consensus disorder prediction 175 208 - -
Lele28g1672 627 FunFam Inactive receptor-like serine/threonine-protein kinase 303 411 - -
Lele28g1672 627 SUPERFAMILY L domain-like 22 123 - -
Lele28g1672 627 Pfam Leucine rich repeat N-terminal domain 20 61 IPR013210 -
Lele28g1672 627 Gene3D Ribonuclease Inhibitor 22 146 IPR032675 -
Lele28g1672 627 PANTHER PROTEIN MALE DISCOVERER 2 6 621 - -
Lele28g1672 627 Pfam Protein tyrosine and serine/threonine kinase 341 593 IPR001245 GO:0004672|GO:0006468
Lele28g1672 627 Gene3D Phosphorylase Kinase; domain 1 303 411 - -
Lele28g1672 627 ProSiteProfiles Protein kinase domain profile. 329 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1672 627 MobiDBLite consensus disorder prediction 209 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1672 Lele-ChrLele28 19217998 19229377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1672 14 597 Receptor kinase-like Gene Family AT3G28450 28.922 8.07e-42 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Lele28g1672 PK_Tyr_Ser-Thr 1e-26 CL0016