Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1670 ATGGCAAACTCTGTTGAGCTTTCAGCGCTAAATCGCATAAAATTGCATCTTCTAGGTGAATTGTCTCCAGTTGGCACTTTCTCCAGAAGCCTTAGCAGTTCCGCGAGCGATAATACTCAACAACTCTGGTTTGGTGAATCAAACGGAGCAATTTCATCGAGTTCTGACTCTTCGATCATTGTGTCCGATTACCTCCCTGAACTGTTCGAATTCCCATCCAACTCCACAAATCTATTTGAGTCCGAGTTCAAAAATCAAGTAATTGACATCTCAACGCCCAAATCGGAAACCGAAACTTCACAATTTGATGCCAATTTCTCCCAATTCGAAGCAGACTCATTGGCAACATCAACCTCTGGCTCACAGTCAAGCAGTTGCACGTTCGAGTTTCAAACTAGACTCCAAAGCGTCGAGAAGAAATCTCATTTCAATCGGAAACCGTCGCTGCAAATCACGCCGCCCAAAAAAACCGAGCGGATCCAATTTGGAAATACGGATCAACAACGGGAGGTTTCAGAAATGTTCGTGCAGAATAATTCAAACCATGAAGAGGAGAAAAAGCACTACAGAGGGGTCCGACAGAGACCGTGGGGAAAGTTCGCCGCCGAGGTTCGGGAGCCGAACAAACGTGGATCTAGGTTGTGGCTCGGAACGTTCGACACAGCAATCGAAGCCGCAAAAGCCTACGATCGAGCTGCTTTTAGGCTTCGCGGCTCCAAAGCCATACTCAACTTCCCTCTGGAAGCAGGGAGTTCGGGTTCGACGGACGGCACGGAGGAGAAAAAACGCCGGCGGGAAGATGAAGAGGTGAAGGAAGAAATAGAAATGAAAAAACCAGTGGTCAAGAAAGAAAAAAAGGCGGAATCTGACGTGGGAAGGATAACGGATATGCCGTTAACGCCGTCCATATGGACGGGGTTCTGGGGGATTGATTTGAAGGACATTTTCTCAGTCCCGCTGTTATCACCGTTATCTTCTCACCCGCCTTTGGGCTATCCACAGGTGGTATGA 1011 0.4777 MANSVELSALNRIKLHLLGELSPVGTFSRSLSSSASDNTQQLWFGESNGAISSSSDSSIIVSDYLPELFEFPSNSTNLFESEFKNQVIDISTPKSETETSQFDANFSQFEADSLATSTSGSQSSSCTFEFQTRLQSVEKKSHFNRKPSLQITPPKKTERIQFGNTDQQREVSEMFVQNNSNHEEEKKHYRGVRQRPWGKFAAEVREPNKRGSRLWLGTFDTAIEAAKAYDRAAFRLRGSKAILNFPLEAGSSGSTDGTEEKKRRREDEEVKEEIEMKKPVVKKEKKAESDVGRITDMPLTPSIWTGFWGIDLKDIFSVPLLSPLSSHPPLGYPQVV 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1670 336 PRINTS Ethylene responsive element binding protein signature 228 248 IPR001471 GO:0003700|GO:0006355
Lele28g1670 336 PRINTS Ethylene responsive element binding protein signature 189 200 IPR001471 GO:0003700|GO:0006355
Lele28g1670 336 FunFam Ethylene-responsive transcription factor 2 187 248 - -
Lele28g1670 336 ProSiteProfiles AP2/ERF domain profile. 188 246 IPR001471 GO:0003700|GO:0006355
Lele28g1670 336 CDD AP2 187 246 IPR001471 GO:0003700|GO:0006355
Lele28g1670 336 Pfam AP2 domain 188 238 IPR001471 GO:0003700|GO:0006355
Lele28g1670 336 Gene3D AP2/ERF domain 187 248 IPR036955 GO:0003700|GO:0006355
Lele28g1670 336 MobiDBLite consensus disorder prediction 246 288 - -
Lele28g1670 336 SUPERFAMILY DNA-binding domain 188 247 IPR016177 GO:0003677
Lele28g1670 336 SMART rav1_2 188 252 IPR001471 GO:0003700|GO:0006355
Lele28g1670 336 MobiDBLite consensus disorder prediction 255 288 - -
Lele28g1670 336 PANTHER DNA-BINDING DOMAIN 131 271 IPR044808 GO:0003700|GO:0009873
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1670 Lele-ChrLele28 19192958 19193968 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1670 1 335 AP2-EREBP Transcription Factor Family AT5G47230 42.012 1.42e-63 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele28g1670 AP2 4.1e-15 CL0081