Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1661 ATGGTGAGAAAGAGAATGGCATCTGAAATGGAAGTTCACACGACGGCGGCACATAACTCCGCCGGCGGCGATTATCATCTGAGATTTCCCCGTCCTAGTGTTGTAGCCTCCTCTCTATTATCCACCGTAGATAAAGCAGCTTCGAGTAATAATAACAGTAAGTATAGCTATCATTGTAAATCTGGTTCACGAGATAATGTTCCTATTCCTAACCCCACAACAGTGACGCTCTCCAACTACTCCACTACCACGCTTCTATCTTCTTCTTCCACTAATCTCACCGCCATGACGTCACCCAACTACAGCAATCGTCATTGCGGTGAAAATCTCTCCCTTCATCCTCATCTTCAAGCTTTTCAACCTCAGACCCACGACCCTTCGCCTATTCCTGCGGTTTGTGGATTCTCGGGCTTGCCTCTATTTCCTTCTGAAAACAATCGGGTTAATAATACCAGTACTACTGCTGCCGCCGCCGCCGTAGACGGTGTTGCTTTGGTGGCCACAAACGCCCACTCCGACGGTCGACTTTCTTCTTCTTCCTCTTCTATGGAAGATAGTTCTGCTATGGCTTGGATCGACGGCATCTTGAAGGATCTCATCCATGGCTCCACTGCCGTCTCCATCCCCCAGCTCATCAACAACGTTAGGGAGATCATCTATCCTTGTAACCCCAACCTTGCTGTCATTCTTGAATACAGACTCCGTCTCCTCACCTCCAATAATACTTCTGAATCTGTTGTAAATTATGGTGACAAGAAAAGGACGGAAGCAGCGCCGCCGCCTCCTCTGATGGTGCCGGTGGTGGGCGTGGGTTTAAATCAGAGGTCTTTTGGCCCGCAAGTAGGCCCCTCTTGTGCCGCCATAGCTCCCAACTTGCATATTCCAAATTCTCCATCCGTTGGGAATCAGATGTACTCAAATTGGGGACTACCTGCGGTCACGGCCTTAACTCACGAAGGAGCCAACCCATCGGTGATTACTTTACCACTATCTCCACTTCCATCGTCAAATCATCAAGGTCATTCGCCACAGGAGGAGCAACAATTTCATGAGAAACAACAAGAGAATCAGAACCAGCAACAAGAAGAGGGAGTTTCTTGCCCTTGCGACAATCGAGCGGCAGCAACAGCGACGACGGCCTCAGCTTCAGAAATCATGCTGGCAAAAAGGAAGAAAGAGGAGATGCAGCAACAGAAGAGAGACGAAGAAGGATTACACCTCCTAACTTTATTGCTTCAATGTGCGGAGGCTGTGGCAGCTGATAACTTCGATGAAGCCAATAAGATGTTGCTAGAGATTTCACAACTATCCACACCCTTCGGTACGTCGGCGCAGCGGGTTGCCGCTTATTTCTCGGAAGCCATATCGGCGAGGCTGATTAACTCATGCTTGGGAATATACGCTACTCTTCCAATAGTGCATCATAGCCAAAAGATGGTATCAGCATTCCAAGTGTTCAATGGGATAAGTCCTTTCGTCAAGTTCTCACACTTCACAGCGAACCAAGCTATACAAGAAGCATTCGAGAGGGAAGGGAGGGTGCATATCATAGATCTTGATATAATGCAGGGATTACAATGGCCTGGTCTGTTTCACATTCTCGCTACAAGAGCTGGTGGACCCCCTTACGTCAGACTTACGGGGCTTGGCACCTCCATGGAAGCTCTTGAAGCTACCGGCAAACGATTGTCGGATTTTGCAAATAAATTGGGACTTCCTTTTGAGTTCTTTCCGGTGGCGGAGAAAGTTGGGAATCTTGATCCTGAGAGGTTATGTGTAAGCAAGACAGAAGCTGTGGCCGTTCACTGGCTCCAACATTCCCTTTATGATGTCACTGGCTCCGATACTAATACACTGTGGCTTTTGCAGAGGCTGGCACCTAAAGTGGTGACGGTGGTGGAGCAGGACCTGAGCCACGCGGGATCATTCTTGGGGAGGTTCGTGGAAGCGATACATTACTACTCAGCACTATTCGATTCGTTGGGATCAAGCTATGGGGAGGAGAGTCAGGAGAGACACGTGGTGGAGCAGCAGCTTCTGTCGAGGGAGATCCGTAACGTGCTGGCCGTCGGCGGTCCTTCGAGGACCGGCGAGCTTAAGTTCCATAACTGGAGGGAGAAGCTTCAGCAATGTGGGTTCAGAGGTATCTCCCTCGCCGGTAACGCCGCCACGCAAGCCAGCCTTCTTCTCGGCATGTTCCCTTGTGATGGGTATACGTTGGTGGAGGACAATGGCACGCTCAAACTTGGTTGGAAAGATCTCTGCTTGCTCACTGCTTCTGCTTGGAGACCTTCCTTCCACAATAATTCCACCACTGCCATCGTTCACCATGGCTGA 2337 0.4972 MVRKRMASEMEVHTTAAHNSAGGDYHLRFPRPSVVASSLLSTVDKAASSNNNSKYSYHCKSGSRDNVPIPNPTTVTLSNYSTTTLLSSSSTNLTAMTSPNYSNRHCGENLSLHPHLQAFQPQTHDPSPIPAVCGFSGLPLFPSENNRVNNTSTTAAAAAVDGVALVATNAHSDGRLSSSSSSMEDSSAMAWIDGILKDLIHGSTAVSIPQLINNVREIIYPCNPNLAVILEYRLRLLTSNNTSESVVNYGDKKRTEAAPPPPLMVPVVGVGLNQRSFGPQVGPSCAAIAPNLHIPNSPSVGNQMYSNWGLPAVTALTHEGANPSVITLPLSPLPSSNHQGHSPQEEQQFHEKQQENQNQQQEEGVSCPCDNRAAATATTASASEIMLAKRKKEEMQQQKRDEEGLHLLTLLLQCAEAVAADNFDEANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLINSCLGIYATLPIVHHSQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREGRVHIIDLDIMQGLQWPGLFHILATRAGGPPYVRLTGLGTSMEALEATGKRLSDFANKLGLPFEFFPVAEKVGNLDPERLCVSKTEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGSSYGEESQERHVVEQQLLSREIRNVLAVGGPSRTGELKFHNWREKLQQCGFRGISLAGNAATQASLLLGMFPCDGYTLVEDNGTLKLGWKDLCLLTASAWRPSFHNNSTTAIVHHG 778
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1661 778 MobiDBLite consensus disorder prediction 326 367 - -
Lele28g1661 778 MobiDBLite consensus disorder prediction 328 343 - -
Lele28g1661 778 Coils Coil 385 405 - -
Lele28g1661 778 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 363 758 IPR005202 -
Lele28g1661 778 MobiDBLite consensus disorder prediction 353 367 - -
Lele28g1661 778 ProSiteProfiles GRAS family profile. 398 763 IPR005202 -
Lele28g1661 778 MobiDBLite consensus disorder prediction 48 70 - -
Lele28g1661 778 MobiDBLite consensus disorder prediction 1 25 - -
Lele28g1661 778 Pfam GRAS domain family 408 763 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1661 Lele-ChrLele28 17953042 17955654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1661 389 764 GRAS Transcription Factor Family AT3G54220 85.789 0.0 665
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele28g1661 GRAS 3e-122 CL0063