Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1648 ATGGCTGTTTCTTCTTCTTCTTCTGCCATTGTTGCCTTATCTTTATTCCTGGTTCTCACAGGGACTTCTTCGGCTCATTTACTCCGTGAGAACTTCTATCATAAAACTTGCCCAAATATTTTCCCCGTTGTGAGATCTGTTGTTAAGTCAGTTGTATCAAAACAGCCTGTTCTTGGAGCTGGTCTGCTTCGTCTCTTCTTTCATGACTGTTTTGTCAATGGTTGTGATGCGTCAATATTACTGGATGACACTTCTACGTTCACCGGAGAGAAGACTGCTCGTCCCAACAATGGATCTGTGAGAGGTTACGAAGTGATTGATCAAATCAAGTCTCAGGTGGAAGCAGCTTGCCCCGGCATCGTCTCTTGTGCTGATATTGTTTACATTGCTGCTCGAGATTCTGTTGTTCTTCTTGGAGGGCCAAATTGGGAGGTTAAATTGGGAAGAAGGGATTCAAAGACAACAAACTTCACTCTTGCAGACAGTGGTGGTTTGCTTCCACCTGCATCTTCTAATTTAAGCAATCTTATTTCTACGTTTCAAGTTCAAGGCCTCTCTACTCGAGACATGGTTGCCCTATCTGGAGGACACACAATAGGGCAAGCAAGATGCCCTAGTTTCACACCTCGCGTATACAACGAGGCCAACATTGATCCTTCTTTTGCCGAGGCAAAGCGGAAGCTTTGTCCATTGACTAATACTCCAACTAATTTTATAGCAAACTTGGACGTTACAACTCCCAACTATTTTGACAATAGCTACTTCAAGAACCTCCTCAACAAGAAGGGACTCCTTCACTCCGATCAAGTTCTCTTTAACGGCGGCGGAACCGATTCGCTGGTTCGCACTTATGCCCAGGATAAGAGGGCCTTTGAAAGGGACTTTGTTTATGGCATGATCAGGATGGGAGACATCAAACCCTTGGTTTATCCAAATGGTGAGATCAGGAAGAACTGTAGGAGAGTGAACTAG 972 0.4444 MAVSSSSSAIVALSLFLVLTGTSSAHLLRENFYHKTCPNIFPVVRSVVKSVVSKQPVLGAGLLRLFFHDCFVNGCDASILLDDTSTFTGEKTARPNNGSVRGYEVIDQIKSQVEAACPGIVSCADIVYIAARDSVVLLGGPNWEVKLGRRDSKTTNFTLADSGGLLPPASSNLSNLISTFQVQGLSTRDMVALSGGHTIGQARCPSFTPRVYNEANIDPSFAEAKRKLCPLTNTPTNFIANLDVTTPNYFDNSYFKNLLNKKGLLHSDQVLFNGGGTDSLVRTYAQDKRAFERDFVYGMIRMGDIKPLVYPNGEIRKNCRRVN 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1648 323 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele28g1648 323 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele28g1648 323 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele28g1648 323 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele28g1648 323 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele28g1648 323 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele28g1648 323 PRINTS Plant peroxidase signature 61 81 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele28g1648 323 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele28g1648 323 PRINTS Plant peroxidase signature 37 56 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele28g1648 323 FunFam Peroxidase 167 302 - -
Lele28g1648 323 SUPERFAMILY Heme-dependent peroxidases 28 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Lele28g1648 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Lele28g1648 323 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele28g1648 323 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele28g1648 323 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele28g1648 323 PRINTS Haem peroxidase superfamily signature 59 73 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele28g1648 323 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele28g1648 323 ProSitePatterns Peroxidases active site signature. 59 70 IPR019794 GO:0004601
Lele28g1648 323 ProSiteProfiles Plant heme peroxidase family profile. 27 323 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele28g1648 323 Gene3D - 31 320 - -
Lele28g1648 323 Pfam Peroxidase 44 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Lele28g1648 323 PANTHER PEROXIDASE 72-RELATED 26 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Lele28g1648 323 Gene3D Peroxidase, domain 2 167 302 - -
Lele28g1648 323 CDD secretory_peroxidase 28 322 IPR033905 GO:0004601|GO:0042744
Lele28g1648 323 FunFam Peroxidase 31 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1648 Lele-ChrLele28 17353470 17362026 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1648 4 323 Peroxidase AT5G58400 60.436 9.64e-137 389