Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1630 ATGGCCATCGTTAAGATAATGGGAGGTTCTCCTTGTGCTTCCTGCAAGTTGCTACGACGTCGTTGCACCAAGGAGTGCATTTTCGCTCCTTACTTTCCTTCTGACGATCCCCACAAGTTTGCCATCGTTCACAAGGAACTTCCGGGGCATCAAAGAGCGGATGCTGTGAGCAGTCTAGTTTACGAGGCGAATGCTAGGGTTAGAGATCCGGTGTATGGATGCGTAGGAGCTATATCGTACCTACAAAGTCAAGTTTCAGAGTTAAAAATGCAGCTTGAAGTGGCTCAAACAGAGATTATGTGCATTCAGATGCAGCACGATCCTACAAACTTATCATCAACTCAACATTATTCGTAA 357 0.4566 MAIVKIMGGSPCASCKLLRRRCTKECIFAPYFPSDDPHKFAIVHKELPGHQRADAVSSLVYEANARVRDPVYGCVGAISYLQSQVSELKMQLEVAQTEIMCIQMQHDPTNLSSTQHYS 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1630 118 Pfam Lateral organ boundaries (LOB) domain 11 96 IPR004883 -
Lele28g1630 118 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 9 110 - -
Lele28g1630 118 Coils Coil 78 98 - -
Lele28g1630 118 ProSiteProfiles LOB domain profile. 10 99 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1630 Lele-ChrLele28 17012459 17014567 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1630 8 109 AS2 family AT2G30130 76.316 1.39e-60 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele28g1630 LOB 4.4e-27 No_clan