Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1628 ATGATGATGGCATCATCGTCGAGCAGTGGATTGACATTCAAACTACATCCTTTGGTGATAGTCAACATTTCGGATCATTATACTCGGGTTAAGTCACAGATGAACCCGCCCATTGCATCCCATCTGAGAAGTACCACCTCCGCTAACACTAATGCCGCTGAAGGAATGGTTTCCCTGCATCCTAGGGTATACGGATGCGTGATTGGAGTACAGAGAGGACGTACCGTAGAGATCTTCAATGGCTTCGAACTTCTTTACGACCCTTCTACCCATTCCCTCGATCGTTCTTTTCTTGAGAAGAAGCAAGAGCTCTACAAGAAGGTTTTCCCTCACTTCTACATACTAGGATGGTATTCAACTGGGAGCGATGCCCAGGAATCAGATATGCATATTCACAAAGCTTTGATGGATATCAATGAAAGTCCAGTGTATGTACTTCTGAATCCTTCAATCAATCATGCTCAGAAGGATCTCCCTGTCAGTATTTTTGAAAGTGAACTGCATGTAATAGACGGGATTCCACAACTGATCTTTGTTCGTTCAAGCTACACTATTGAGACTGTCGAAGCAGAACGGATTTCAGTTGATCATGTTGCGCATCTTAAGCCATCCGATGGCGGTTCAGCTGCTACACAATTGGCTGCTCACCTTGCTGGTGTACACAGTGCTATTAAAATGCTGCATAGCAGAATTAAGGTGCTTCATCATTATCTTCTAGCAATGCAGAAAGGTGAAGTCCCTTGTGACCATTCTCTTCTAAGACAAGTATCAAGTCTCCTGAGAAGATTGCCAGCAATTGAATCTGGGAAATTCCAAGATGATTTCTTGATGGAATACAATGATACCTTATTGATTACTTACCTTGCTATGATGACCAACTGCTCAAGTGCAATGAACGAACTTGTAGACAAATTCAATACAGCATACGACAGGCATAGCAGAAGGGGCGGGCGAACTGCTTTTATATGA 969 0.4314 MMMASSSSSGLTFKLHPLVIVNISDHYTRVKSQMNPPIASHLRSTTSANTNAAEGMVSLHPRVYGCVIGVQRGRTVEIFNGFELLYDPSTHSLDRSFLEKKQELYKKVFPHFYILGWYSTGSDAQESDMHIHKALMDINESPVYVLLNPSINHAQKDLPVSIFESELHVIDGIPQLIFVRSSYTIETVEAERISVDHVAHLKPSDGGSAATQLAAHLAGVHSAIKMLHSRIKVLHHYLLAMQKGEVPCDHSLLRQVSSLLRRLPAIESGKFQDDFLMEYNDTLLITYLAMMTNCSSAMNELVDKFNTAYDRHSRRGGRTAFI 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1628 322 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED 3 313 - -
Lele28g1628 322 Pfam Maintenance of mitochondrial structure and function 189 303 IPR024969 -
Lele28g1628 322 Pfam JAB1/Mov34/MPN/PAD-1 ubiquitin protease 9 141 IPR000555 GO:0005515|GO:0008233|GO:0008237
Lele28g1628 322 Gene3D Cytidine Deaminase, domain 2 1 203 - -
Lele28g1628 322 CDD MPN_CSN6 11 318 IPR033859 GO:0000338|GO:0008180
Lele28g1628 322 FunFam COP9 signalosome subunit 6 3 203 - -
Lele28g1628 322 ProSiteProfiles MPN domain profile. 40 169 IPR037518 -
Lele28g1628 322 SMART pad1_6 12 168 IPR000555 GO:0005515|GO:0008233|GO:0008237
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1628 Lele-ChrLele28 16754822 16773008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1628 4 273 Eukaryotic Initiation Factors Gene Family AT2G39990 21.818 3.49e-09 55.1