Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1609 ATGGAGTCCGACATTTGCGTTAATACTTCGTGCGGAGTGGTCACTGCTTCCGAATGGAAGAAGGGGTGGCTGCTGCAATCTGGTGGATTTGCCAAACTCTGTGATAAGTGCGGCGGATGCATTGTATCTAAATCTTTGTTCGAGTACCTTGATTTTGGCGGTATAGGCTGTATTAGCTGTGTAAAGTCTCCCCAACTTCATTTGATGCAAAATAGTGAAATTTCTAATGGGTCTATTACATCAACCAAAAATGTTGCAAGTGACCGACATTCTTCTCATATTGATGGTAGAATCTCTCTGGATAATGTTCATGAAGGGAAACTTATGCAACTGTGCAAAATTGTTGAGGCTAGTGAATCTAGCCACTGGCCTCAAGTTCCAAGAGATGGGATGCTTTTATCCAGTGGGCAGAATAGCCAGGAAGTTAAGCGCCCGATCCGGGAAGTGGATCCAGGATTTTCAAATGTGATGAATCCATCTGTTCAGTCATTAACATTTGCCAAATTAGAAAATAGCAGACTGGCATGGGAGCTAAAAAATATGCAAGAATTACCTGTGCAGCCGTCATTGCGCATGTCTCTAGGAACTCCATCCGGAAACTCTGTCCTGCGTTCTGCTGGAGAGATTGTAGAAGGAAGTGGTGAGGAAAAGCCATCTCCTTTTCATCAAGGGCAAAGATCTCGTCCTATATTGCCCAAACGACCAAAGACTGGATTAACCATAAATCAAGAAACAAATAAAGGCATGCTTTCTCAGCTACGAATAGCCCGACCACCTGCTGAGGCCAGGGCCAAGAATCAGTTGCTTCCTCGATACTGGCCCAGGATCACTGATAAAGAGCTGGAGCAATTGTCTGGAGATTTGAAGTCTACTGTAGTGCCACTATTTGAGAAGGTATTGAGTGCCAGTGATGCAGGTCGAATTGGCCGTCTTGTTCTTCCAAAAGCATGTGCTGAAGCTTATTTTCCTCCCATTTCTCAATCAGAAGGTCTTCCTTTGCGGATCCAAGATGTGAAGGGGAATGAGTGGACATTTCAGTTTCGATTTTGGCCCAATAACAACAGTAGGATGTATGTGTTGGAGGGCGTGACTCCTTGCATACAATCCATGCAATTACATGCTGGTGATACTGTTATTCGTCAACATAATCCCAGATATTGTGTTTATCCAGGGGGAAAACTTGTTATCGGTTTCAGGAAGGCATCTAATTCTGTAGATACACAGGATGCCTCTACATCTGCACCTTCAAATGGCATTTCAATGAAGGATATTTCTTGTTTGGGGGTCACTGATAATCTTCACTCAGGAAACAATTATCCTGTTCCTCTCCAGTCGATGAAGGGGAACAGGGAAGCTTACTCAAATGGACTTTCAGAACATCTGCCTTTGAATAGTGTGAATGCTGTTTTGCCTAACTCTGAAAATTGTGGAAGCATGACAAACAATGACTCTCTGCAGCAGCCAATTTCAGGTTCAGAGAAGAAGAGGACTCGAAATATTGGTTCTAAAAGTAAGAGGTTGCTCATTCATAGTAAAGATGCTCTGGAGTTGAGACTTACTTGGGAAGAAGCTCAAGACTTACTTCGTCCACCACCTAGTGTCAAGCCAAGCTTGGTTACAATAGAGGACCATGTGTTTGAAGAGTATGATTTTCTGTTTTACCTGGCTAATAAAGGATCTGTATGCTTCATGTTGATTTAG 1701 0.4309 MESDICVNTSCGVVTASEWKKGWLLQSGGFAKLCDKCGGCIVSKSLFEYLDFGGIGCISCVKSPQLHLMQNSEISNGSITSTKNVASDRHSSHIDGRISLDNVHEGKLMQLCKIVEASESSHWPQVPRDGMLLSSGQNSQEVKRPIREVDPGFSNVMNPSVQSLTFAKLENSRLAWELKNMQELPVQPSLRMSLGTPSGNSVLRSAGEIVEGSGEEKPSPFHQGQRSRPILPKRPKTGLTINQETNKGMLSQLRIARPPAEARAKNQLLPRYWPRITDKELEQLSGDLKSTVVPLFEKVLSASDAGRIGRLVLPKACAEAYFPPISQSEGLPLRIQDVKGNEWTFQFRFWPNNNSRMYVLEGVTPCIQSMQLHAGDTVIRQHNPRYCVYPGGKLVIGFRKASNSVDTQDASTSAPSNGISMKDISCLGVTDNLHSGNNYPVPLQSMKGNREAYSNGLSEHLPLNSVNAVLPNSENCGSMTNNDSLQQPISGSEKKRTRNIGSKSKRLLIHSKDALELRLTWEEAQDLLRPPPSVKPSLVTIEDHVFEEYDFLFYLANKGSVCFMLI 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1609 566 MobiDBLite consensus disorder prediction 212 240 - -
Lele28g1609 566 FunFam B3 domain-containing transcription repressor VAL1 274 406 - -
Lele28g1609 566 SMART B3_2 296 402 IPR003340 GO:0003677
Lele28g1609 566 CDD B3_DNA 294 379 IPR003340 GO:0003677
Lele28g1609 566 Gene3D - 274 406 IPR015300 -
Lele28g1609 566 ProSiteProfiles B3 DNA-binding domain profile. 296 402 IPR003340 GO:0003677
Lele28g1609 566 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS07G0563300 3 550 - -
Lele28g1609 566 Pfam B3 DNA binding domain 296 379 IPR003340 GO:0003677
Lele28g1609 566 SUPERFAMILY DNA-binding pseudobarrel domain 293 379 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1609 Lele-ChrLele28 16063072 16067474 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1609 1 550 B3 DNA Binding Superfamily AT4G32010 42.564 2.70e-125 384
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Lele28g1609 B3 1.3e-12 CL0405