Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1605 ATGGGTAATCACAGGTTCAAATTTTCTGATATGATACCAAATGTTTGGTTTTACAAGCTCAAAGACATGAGCAGATCAAGGAAGAAGAACAAGGCAAGTTCAGTGACACCATCTCTGAGATCGCAGCCAAGGTGTTCGAATTATTTCCCCAGGGAAATGAGTAGTATTAGTAGACCTGGTAAGTTGTATAATTCTCCCATTTTCAGTACCAGAGGAGCTTCTGAGATTCCTTTCATTGATTCTCCAAGAAGGTCTTCTAAGAGAAGAACAAGGAGAAGAACAGTTTATTACAAACCTTCTTCTCCAACACTTGTTTCTTCCTCTGTTTCTGCAACTTCTAGCTGCCATTCCATTAATAATTGGCCTCATCAACCCAATCTTCAAACTCAGTCTCCTGATTACTATATCTCCTCTGCTGAGAGTTCTTCTGAATCAGACCTTCATGATGATGATATTGTTTCATCTGAATCTGAATGTGATAGTTTTTCTGCTGCTGCTGCTGCTGCTGATTCTGCCCCTCCTGATATGTTCAATGGGTTACCCTCAAATTGCAGTTGCAGAGTTAGTTCTTCTACCAATGATATCATCATTGACATGAACAATGAAGTGCCCTTTCATCAAGTGAATAATTCTGAGAAGCTTGATGGGTTTGAAACAATTTCAGAGTTGGATCTTCCTCCAATCTTGACAAAGCCACCATTAAAGTTCGATGATGATGATGATGAGAAGTTCATTAAGGCCACAGCCACTGAGTTGAGAAGTTCATCCAGGTCACAATCTGTTAACAATGGCTTCAAGAAAGAGAGCATTAGAACAACTCAGAGAGATCGAAGACCGAGTCATAATAACAATAATGGTCGAAAATCATCGGTTAATTCTTCTACAGGAATCAGACTCAGAGTGAATTCTCCAAAGCTAGCAGCAAGCAGAAAAGTCCAAGCTGCTTCTTCTGCAAGGAGAAGGAAGAATAATAATGCAGGATTTCCAGAGGGCTTTGCAGTAGTAAAGTCATCATTTGATCCACAGAGAGACTTCAGAGATTCAATGTTGGAGATGATCATGGAGAACAACATAAGGGCTTCAAAGGATTTAGAAGATTTACTTGCATGCTATCTTTCACTGAATTCAAGTGAATACCAGGAGCTCATTGTCAAAGCATTTGAGCAAATCTGGTTTGACATGGCTCAACTCAAATTGTAA 1200 0.3958 MGNHRFKFSDMIPNVWFYKLKDMSRSRKKNKASSVTPSLRSQPRCSNYFPREMSSISRPGKLYNSPIFSTRGASEIPFIDSPRRSSKRRTRRRTVYYKPSSPTLVSSSVSATSSCHSINNWPHQPNLQTQSPDYYISSAESSSESDLHDDDIVSSESECDSFSAAAAAADSAPPDMFNGLPSNCSCRVSSSTNDIIIDMNNEVPFHQVNNSEKLDGFETISELDLPPILTKPPLKFDDDDDEKFIKATATELRSSSRSQSVNNGFKKESIRTTQRDRRPSHNNNNGRKSSVNSSTGIRLRVNSPKLAASRKVQAASSARRRKNNNAGFPEGFAVVKSSFDPQRDFRDSMLEMIMENNIRASKDLEDLLACYLSLNSSEYQELIVKAFEQIWFDMAQLKL 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1605 399 Pfam DNA-binding domain 1 37 IPR025830 GO:0003677
Lele28g1605 399 MobiDBLite consensus disorder prediction 269 283 - -
Lele28g1605 399 MobiDBLite consensus disorder prediction 249 327 - -
Lele28g1605 399 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 166 394 IPR038933 GO:0045892
Lele28g1605 399 MobiDBLite consensus disorder prediction 249 268 - -
Lele28g1605 399 ProSiteProfiles OVATE domain profile. 334 393 IPR006458 -
Lele28g1605 399 MobiDBLite consensus disorder prediction 30 53 - -
Lele28g1605 399 MobiDBLite consensus disorder prediction 284 300 - -
Lele28g1605 399 Pfam Transcriptional repressor, ovate 338 394 IPR006458 -
Lele28g1605 399 MobiDBLite consensus disorder prediction 27 53 - -
Lele28g1605 399 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 332 394 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1605 Lele-ChrLele28 15976979 15978178 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Lele28g1605 Ovate 5.4e-23 No_clan