Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1600 ATGGAGCCAGAGATCGAACCTGATATGGAGGACAACATTAATGCCTTGTTCGGCAAATATGAACTTGGAAAACTTCTGGGTTGTGGAGCCTTCGCTAAGGTCTACCATGCCCGTAACCTGGAAACCTCCCAGAGTGTCGCCATTAAGGTCTTCAACAAGAAGAAGATCACCAGCTCCGGCCTCACCTCCCATATCAAGCGCGAGATCGTCATCATGAGCCGGCTCTGTCATCCCAACATCGTCGGGTTCCACGAGGTCCTCGCCACAAAGACGAAGATCTTCTTCGTCATTGAGTTGGTTAAAGGTGGCGAGTTATTCTCTAGAATCGCCAAGGGACGATTTTCTGAGGATCTCAGCCGGAAATATTTCCAGCAGTTGATCTCCGCCGTTGGGTACTGCCACTCCCGGGGTGTGTTCCACCGCGACTTGAAGCCGGAGAATCTTCTCCTTGATGAACATGGCAACCTCAAGGTTTCGGATTTTGGGTTGAGTGCCGTCAGAGATCAGATCCGACATGATGGGTTGCTTCATACGCTCTGCGGCACACCGGCCTATGTGGCGCCGGAGATTCTGTCCAAGAAAGGGTACGACGGAGCGAAGGTGGATGTGTGGTCGTGCGGTGTCATTCTCTTCACGTTGGCTGCCGGATATTTACCCTTCAATGACCCGAATCTCATGGTTATATACAGGAAGATTCAAAAAGGAGAATTTCGGTGTCCAAGGTGGATGTCGCCGGAGCTAAAGCGATTCCTGTCGCGGCTGCTTGACACGAATCCTAATACCCGGATCACTATTGGTGATATTCTTCAGGATCCATGGTTCAAGCAAGGGTACAAGGAGGTGAAGTTCCAGGAGGATGATTTTGGGTTCGAGACGAAGAATAATGGAGAGCCGGAGATAATCCAATTGAATGCATTTGATCTTATATCCTTCTCCGCGGGATTGGACCTATCCGGTTTGTTCTATAATGCGGCGGAGAGAAGCGAGCGGTTTGTATCATCTGAGTCGCCGGAGAAGATAATGGAAAAGGTGGAAAAGGTGGCGAAGGCGGAGGGTCTGGCTGTGAGAAGGAGGATGAAAGAGTATAGGGTGGGGGTGGAAGGAGTTAGGGACAATTTGGGAATGTCGGTAGAAGTTTACCGGTTAACGGATGAGCTGGTGGTGGTGGAGGCAAAGAGAGGTGGAGTGAACGGCATCGTTTTTATTGAGCGTCTTTGGAACAACAGGTTAAGGCCATTACTCCGCGATTCCGTCTGTACCACTGACTCGACGTCGTATCAAGTGGGAGGTTAA 1293 0.5043 MEPEIEPDMEDNINALFGKYELGKLLGCGAFAKVYHARNLETSQSVAIKVFNKKKITSSGLTSHIKREIVIMSRLCHPNIVGFHEVLATKTKIFFVIELVKGGELFSRIAKGRFSEDLSRKYFQQLISAVGYCHSRGVFHRDLKPENLLLDEHGNLKVSDFGLSAVRDQIRHDGLLHTLCGTPAYVAPEILSKKGYDGAKVDVWSCGVILFTLAAGYLPFNDPNLMVIYRKIQKGEFRCPRWMSPELKRFLSRLLDTNPNTRITIGDILQDPWFKQGYKEVKFQEDDFGFETKNNGEPEIIQLNAFDLISFSAGLDLSGLFYNAAERSERFVSSESPEKIMEKVEKVAKAEGLAVRRRMKEYRVGVEGVRDNLGMSVEVYRLTDELVVVEAKRGGVNGIVFIERLWNNRLRPLLRDSVCTTDSTSYQVGG 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1600 430 FunFam Aurora kinase A 13 103 - -
Lele28g1600 430 ProSiteProfiles Protein kinase domain profile. 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1600 430 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 13 393 - -
Lele28g1600 430 CDD CIPK_C 304 415 - -
Lele28g1600 430 ProSitePatterns Protein kinases ATP-binding region signature. 26 49 IPR017441 GO:0005524
Lele28g1600 430 ProSitePatterns Serine/Threonine protein kinases active-site signature. 138 150 IPR008271 GO:0004672|GO:0006468
Lele28g1600 430 Gene3D Transferase(Phosphotransferase) domain 1 11 304 - -
Lele28g1600 430 ProSiteProfiles NAF domain profile. 298 322 IPR018451 GO:0007165
Lele28g1600 430 SUPERFAMILY Protein kinase-like (PK-like) 17 284 IPR011009 -
Lele28g1600 430 FunFam Non-specific serine/threonine protein kinase 10 299 - -
Lele28g1600 430 Gene3D Kinase associated domain 1, KA1 305 419 - -
Lele28g1600 430 Pfam NAF domain 302 356 IPR004041 GO:0007165
Lele28g1600 430 SMART serkin_6 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele28g1600 430 Pfam Protein kinase domain 20 274 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1600 Lele-ChrLele28 15816161 15817453 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1600 2 428 CBL-interacting serine-threonine protein kinases AT2G30360 62.673 0.0 539
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele28g1600 Pkinase 1.8e-71 CL0016