Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele28g1594 ATGGTCGCCGCGATCTTCTGTGACAGAACAGCGGCGCCATGGCCAGAATTTGTATCCAAACATATCATAAAGCCATCTTCTCCAACACCCCAGAACCTTAGAACTTTTAAGCTTTCTTTCATTGACCAGCTTGCTCCTATATTGCACACTCGAGTTCTACTTTTCTATCCCATTACTGAAAACCATGATCTTGGTAATCACGACGTGTTTGAGAGGCTAAAGACATCATTGTCTGAGACTCTAACCCATTTCTATCCACTGGCAGGTAGAGTCAAAGACAACAAAGTGATTGAATGTAACGATGAAGGTGTCGAGTTTTGTAAGGCTCGTGTCCATGGCTTCGTCTCCGACATCCTTAAACAACCCGATGCTGACATGGTACACCAGTTTGTGCCTGTGGATGATGCTCACTTGGAAAGTGGGTTTTTAATGAAAGTTCAAGTGAATTTGTTTGATTGTGGAGGTTTGGCTATTGGTGTGTCGTTTTCTCACAAGATTGCTGATGCTTCATCAATTGGTTTGTTCATTAAGGCTTGGTCTTGCACGGCAGTTGGGTGTGTTAATGAATCGATGCTTCCAAAGTTCATTATGGAATCTTATTTCCCTTCCATGGAGTTCTCAATTGGCCTACCACCTTTAGAGTTCAAACCCACCATTTGTATCACAAGAAGGTTTGTGTTTGATTCGTCAAAGATAACAAAACTGAAGGCTGAAGCTGCAAGCAAAATGGTGGAGAATCCTACAAGAGTGGAGGCAGTATTAGCCCTAATTTGGAAGTGTGCCACAACAGCATCAAGAACAAACCTAGGAATAACCAAAAGACCCTCCATGGCATTACAAGCAGTAAACATTCGTAAAAGGACAAGCCCACCGTTACCGGAGACATGCGTCGGCAACTTCGTTGGTCAGTTTATAGCAAAACCAGGAGAGTCTGATGACATTGAAATGAACTTACAAGGGCTAGTAATTCATCTAAGGGAAGGTCTTGAACACTTCTCAAAGGTTCATGTCCCAAAACTACAAGAAGCAAATGCTTTCATGACGTTTTGTGAAGGAATGAAGGACATGTTACTGGTGTACAAAGAGGATATAGATTTCTATGGTTGTACAAGTTGGTGTACTTTTGGGTTTTACGAAGCAGATTTTGGATGGGGAAAACCCAAGTGGGTGAGTATTCCTTCTATGAAGATAAGGAATTCTATTATTCTGATGGATACGAGTGATGGAAAAGGAATCGAAGCATTGGTGACTTTGAGGGAACAAGATATGGCGTTGATGGAGAGTAATAATGAATTGCTTGAATTTGCGTCTTTTAATCCAACTATCATATAA 1332 0.4144 MVAAIFCDRTAAPWPEFVSKHIIKPSSPTPQNLRTFKLSFIDQLAPILHTRVLLFYPITENHDLGNHDVFERLKTSLSETLTHFYPLAGRVKDNKVIECNDEGVEFCKARVHGFVSDILKQPDADMVHQFVPVDDAHLESGFLMKVQVNLFDCGGLAIGVSFSHKIADASSIGLFIKAWSCTAVGCVNESMLPKFIMESYFPSMEFSIGLPPLEFKPTICITRRFVFDSSKITKLKAEAASKMVENPTRVEAVLALIWKCATTASRTNLGITKRPSMALQAVNIRKRTSPPLPETCVGNFVGQFIAKPGESDDIEMNLQGLVIHLREGLEHFSKVHVPKLQEANAFMTFCEGMKDMLLVYKEDIDFYGCTSWCTFGFYEADFGWGKPKWVSIPSMKIRNSIILMDTSDGKGIEALVTLREQDMALMESNNELLEFASFNPTII 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele28g1594 443 Pfam Transferase family 16 432 - -
Lele28g1594 443 Gene3D - 16 207 IPR023213 -
Lele28g1594 443 Gene3D - 219 435 IPR023213 -
Lele28g1594 443 PANTHER F21J9.9 16 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele28g1594 Lele-ChrLele28 15739790 15743244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele28g1594 22 427 Monolignol Biosynthesis Gene Families AT5G48930 24.831 3.97e-26 108